Lysobacter capsici: LC55x_3573
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Entry
LC55x_3573 CDS
T04162
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00550
Peptidoglycan biosynthesis
lcp01100
Metabolic pathways
lcp01502
Vancomycin resistance
lcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LC55x_3573
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LC55x_3573
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LC55x_3573
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcp01002
]
LC55x_3573
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lcp01011
]
LC55x_3573
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
lcp01504
]
LC55x_3573
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
LC55x_3573
Peptidases and inhibitors [BR:
lcp01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
LC55x_3573
Peptidoglycan biosynthesis and degradation proteins [BR:
lcp01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
LC55x_3573
Antimicrobial resistance genes [BR:
lcp01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
LC55x_3573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Motif
Other DBs
NCBI-ProteinID:
ALN86829
LinkDB
All DBs
Position
4003629..4004432
Genome browser
AA seq
267 aa
AA seq
DB search
MRGPGTVLINTPEIELWPGGLLRARSNHDARALARARHVLRRKRDGRFLAADLPEGLLPL
VHRLMREDGIDAAFDALDRIVEYRREGLVRVHELPLDRIEHRLDALGLDGVAYEQRSGLA
LVAEPDRLALAGVDRFRRPLWLHPAAARAWTHLREAAQRDGIVLDAISGYRSHDYQLGIF
ERKLARGLSVEEILTVNAAPGYSEHHSGLALDIGAPGEPPAEESFEHTAAFAWLRERAGG
YGYAMSYPRGNPHGIVYEPWHWRYTPA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccccggcactgtcctgatcaacacgcccgagatcgaactgtggccgggcggc
ctgctgcgcgcgcgcagcaaccacgacgcccgcgccctggcgcgcgcgcggcacgtgctg
cggcgcaagcgcgacggccgtttcctcgccgccgacctgcccgaggggctgctgccgctg
gtccaccggctgatgcgcgaagacggcatcgacgccgcgttcgacgccctggaccgcatc
gtcgaataccgccgcgaaggcctggtccgcgtgcacgagctgccgctggaccggatcgaa
caccggctcgacgcgctcggcctggacggcgtcgcctacgaacaacgcagcggcctggcc
ctggtcgccgaacccgaccgattggcgctggccggggtcgaccgcttccgccgcccgctg
tggctgcacccggccgccgcgcgcgcctggacccacctgcgcgaagccgcgcaacgcgac
ggcatcgtgctcgacgcgatctccggctatcgcagccacgattaccaactgggcatcttc
gaacgcaaactcgcgcgcggcctgagcgtcgaggagatcctcaccgtcaacgccgcgccg
ggctacagcgaacaccacagcggcctcgccctggacatcggcgcgccgggcgaaccgccg
gccgaggaatcgttcgaacacaccgcggccttcgcctggctgcgcgagcgcgccggcggc
tacggctatgcgatgagttatccgcgcggcaatccgcacgggatcgtctacgaaccctgg
cattggcgctacacgccggcctga
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