Lysobacter capsici: LC55x_4470
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Entry
LC55x_4470 CDS
T04162
Name
(GenBank) HAMP domain protein
KO
K07637
two-component system, OmpR family, sensor histidine kinase PhoQ [EC:
2.7.13.3
]
Organism
lcp
Lysobacter capsici
Pathway
lcp01503
Cationic antimicrobial peptide (CAMP) resistance
lcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LC55x_4470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
LC55x_4470
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcp01001
]
LC55x_4470
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lcp02022
]
LC55x_4470
01504 Antimicrobial resistance genes [BR:
lcp01504
]
LC55x_4470
Enzymes [BR:
lcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LC55x_4470
Protein kinases [BR:
lcp01001
]
Histidine kinases
OmpR family
LC55x_4470
Two-component system [BR:
lcp02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
LC55x_4470
Antimicrobial resistance genes [BR:
lcp01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
LC55x_4470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
HisKA
HATPase_c_5
GDH_C
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
ALN87718
LinkDB
All DBs
Position
complement(4955680..4957089)
Genome browser
AA seq
469 aa
AA seq
DB search
MSWGQPRSLRARQLLAASLGLLAFLALAGYALDRAFLETAESNLRQRLTSYALAYAADTD
FGRGGEIIPPYDPPDPRFDRPGSGLYAEVILPDGHWDSMSAQGPVLPDGGMLKPTEETFE
GPLPVTEISGRTGEAYRYGRGLIWSVDGDAKAEFQYTIYILEDTSALRHQVAVFRQALWR
YLGGAGVILLLLQALIMQWSLRPLKRVIEELKRVQRGLASRMSERHPRELEPLTESINAF
IESERENLDRQRNTLADLAHSLKTPLAVLHARLDDENGPVPIDPELREDVSVQLRRMNDL
VSYQLARAASGGHALFAAPIAIESHAEEIVRGLEKVYASKGVLCEFDLADGVQFHGEPGD
LQELLGNLLENAFKWANSRVLLTVQPGETAANRRPGLLLAVDDDGPGIPPEKVASILQRG
VRGDERVHGHGIGLAIVQDLVRGYRGTLDVTPSEELGGTRFEVKLPPGL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgagctggggacagccgcgctcgctgcgcgcgcgccagttgctggccgcgagcctgggc
ctgttggcgttcctggccctggccggttacgccctcgaccgcgcgttccttgagaccgcc
gaaagcaatctgcgccagcgcctgaccagttacgcgctggcgtacgcggccgacaccgat
ttcggccgcggcggcgaaatcatcccgccctacgatccgccggacccgcgtttcgaccgg
cccggcagcggtctgtacgccgaggtcatcctgcccgacgggcactgggattcgatgtcg
gcgcaaggaccggtgctgcccgacggcggcatgctcaagcccaccgaggaaaccttcgaa
ggcccgctgccggtcaccgagatcagcggccgcaccggcgaggcctaccgttacgggcgc
ggcctgatctggagcgtcgacggcgacgccaaggccgaattccagtacacgatctacatt
ctcgaagacaccagcgcgctgcgccatcaggtcgcggtgttccgtcaggcgctgtggcgt
tacctcggcggcgccggcgtgatcctgctgctgttgcaggccttgatcatgcagtggagc
ctgcgtccgctcaaacgcgtgatcgaggaactcaagcgcgtgcagcgcggcctggcctcg
cgcatgagcgaacgccacccgcgcgagctcgaaccgctgaccgaaagcatcaacgccttt
atcgagagcgaacgcgaaaatctggaccgccagcgcaacactctggccgatctcgcccac
agcctgaaaacgccgctggcggtgctgcatgcgcgcctggacgacgaaaacgggccggtg
ccgatcgatccggaattgcgcgaagacgtcagcgtgcaactgcggcgcatgaacgatctg
gtgtcgtaccagctcgcgcgcgccgcgtcgggcggacacgccttgttcgccgcgccgatc
gcgatcgaatcgcatgccgaggaaatcgtgcgcggcctggaaaaggtctatgcctccaag
ggcgtgctgtgcgagttcgatctcgccgacggcgtgcagttccacggcgaacccggcgac
ttgcaggaactgctcggcaacctgctggaaaacgcgttcaagtgggcgaactcgcgggtg
ctgctgacggtccagcccggcgagaccgcggccaaccgccggcccggcctgctgctcgcg
gtcgacgacgacggccccggcattccgcccgagaaggtcgcgtctatcctgcagcgcggc
gtgcgcggcgacgaacgcgtgcacggccacggcatcggcctggcgatcgtgcaggatctg
gtgcgcggctatcgcggcaccttggacgtaacgccgtcggaggaactgggcgggacgcgg
ttcgaagtgaaactgccgccggggttgtag
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