Lucilia cuprina (Australian sheep blowfly): 111683033
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Entry
111683033 CDS
T06013
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111683033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcq03400
]
111683033
Enzymes [BR:
lcq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111683033
DNA repair and recombination proteins [BR:
lcq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111683033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT_2
BRCT
SPN1_m3Gcap_bd
mRNA_cap_enzyme
LEA_4
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
111683033
NCBI-ProteinID:
XP_023300833
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All DBs
Position
3:32025592..32029286
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AA seq
924 aa
AA seq
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MDIADTIKFRDICSMLKKIKEYENKDKKAKIVKQYYDSFCKHREKFREQQQLKPEMEEDG
RSSFYCVLRCLIPNADMARPPYGLQIPSLGKVFIKILQLGSESRDAEILEARNFNGFRGD
YADRLYRVLKPRCSHQPSNLTLKQVHDMLDTIANENRLNTEKVLIQLSETASAEEQMWFV
RLLLKSMHLGIGDQRIFGILHPQAKAFFQICANLSKLCCNIADNNFNLAISAPSTSSALG
ALDLPVNIQPFEYIRPQLCEIFPGNIENLMAKDVLYMETKMDGERFQLHYENNRFKYFSR
NGIDYTHSFGSCYDENNKLTTKLQHLLPIGMTSVILDGEMMVWNTYHNKYHEKSENTDVK
NLNNTRNCQPCFVVYDLLFWNGESMLKMPYIQRMHKLKHLFKEQEGVLQLMKTVKITSPE
DFTQKFQQALDRHEEGVVLKQQRASYAPGRRNGSGWYKVKADYIKGLTTEFDLLVIGAFF
NRTRTFVESFLVGVLKYVSLQQFEVYSIGKVSNNTTQRVVLNNTLKPHWHLATEEPPPLW
YHYRETSAEGRPDAWIEPRNSVILQIKATDLNPSGAFALSMALHFPRIQAWRNDKLWHEC
LSLEEYNQLKQCSGGGAIKKIVKRTVISKDFTAERAKRTKMTAAEKRNLGLQAYNKKFDP
SNVEKISNLLNDFSVCILSASLNRGYTPEYLKTLVVQNGGTVVDNPLPNNPTCIVIAGDK
TYRVEMLCKAQQYDIVSMDWFLYICEKQIFKLRPRDMLSMTDNLRERFSKFYDKWGDHYT
EFVSSKELKRICDHMPDKDVPDLDDEQLLELENLIYKKLNRNWFRNKYAYFYTFDAQSEK
ANLSYQWHGGNVLNDSNLNSESYKKINYIFINLIQFDKTKFLHWLKERFSDNLSDLQIIN
VTWILESHKARILLDINEYTWHDF
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggatatagcagatacaattaaatttcgtgatatatgttctatgttaaagaaaattaag
gaatatgaaaataaagataaaaaagcaaaaattgttaaacaatattatgattcattttgt
aaacatcgagaaaaattcagggaacagcaacaattgaaaccagaaatggaagaggatgga
cgcagtagtttctattgtgtattaagatgtctgataccaaatgccgatatggctcgtccc
ccatatggcctgcaaataccctctttgggtaaggtgtttattaagattttacagttgggt
tcggagtcaagagatgctgaaatcctagaagctcgcaattttaatggatttcgcggtgac
tatgccgataggctttatcgagtcctaaagccacgttgcagccatcaacctagtaattta
acgctaaaacaagtgcatgacatgttagatactatagcaaatgaaaatcgattaaatacg
gaaaaagttcttatacaactctctgaaaccgcttcggctgaagaacaaatgtggtttgtg
cgtcttctattaaaatctatgcatttgggtattggagatcaacgtatttttggcatatta
catccacaggccaaggcattttttcaaatctgcgccaatctctctaaattgtgttgcaat
attgctgataataattttaatctagccatctcagcaccatcaacttcatctgcattagga
gctttagatttacccgtcaacatacagccttttgaatatattagaccgcagctgtgtgaa
atatttcctggtaatatagaaaatctcatggcaaaggatgttttatatatggaaactaaa
atggatggtgaaagattccagttacattatgaaaataatcgttttaaatatttctcccgt
aatggcattgattatacgcatagctttggttcctgctatgatgagaacaataaattgacc
acgaaacttcagcatcttttacccataggtatgacttcagtgattctagatggtgaaatg
atggtgtggaatacttatcataataagtatcatgaaaagagtgaaaatactgatgttaaa
aatttaaataatacccgcaattgtcaaccttgttttgtggtctatgatctgttgttttgg
aatggtgaatcaatgctaaaaatgccctacatacagagaatgcataaactgaagcatttg
tttaaggagcaggagggtgttttgcagctaatgaaaactgttaagataacatcgccggaa
gattttacgcagaaatttcaacaagctttggatcgacacgaagagggtgttgtgttgaaa
caacagagagcgtcttatgcaccaggacgtaggaatggtagtggatggtataaggttaaa
gcagattatataaaaggcttaacgactgaattcgatcttctggtcatcggtgcatttttc
aatcgtactcgcacatttgtagaatctttcctggtaggtgtgcttaaatatgtttctctt
caacaattcgaagtctattcgattggcaaagttagcaacaatactacacaacgagttgtt
ctaaataacactttaaaacctcattggcatttagctacggaggagccaccaccattgtgg
tatcattatagggaaacaagtgccgaaggtcgaccagatgcctggatagaacccagaaat
tctgttattttgcaaataaaagctaccgatttaaatccttctggtgcttttgctttatca
atggctttacattttccacgtatacaagcctggcgtaacgataaattgtggcatgaatgt
ttgtctttggaggaatacaaccaattgaaacaatgttctggtggaggtgccatcaaaaag
attgttaagagaactgtaatttcaaaagattttactgcggaaagggcaaaacgcacgaaa
atgacagcggctgagaaacgtaatctgggtttgcaggcatataacaaaaagtttgatccc
tctaatgtggaaaaaatttcaaatttattgaatgactttagtgtttgtatactaagtgct
tccctaaataggggctatactccggagtatttaaaaactttggtcgtgcaaaatggtgga
actgttgtagacaatccattacccaataatcccacttgcattgtgatagccggtgataaa
acctatcgcgtggaaatgctttgtaaagcccaacaatatgacatagtctctatggattgg
tttttgtatatttgtgaaaaacaaatattcaaattaagaccacgtgatatgttgtccatg
actgacaatctaagagaacgtttcagcaaattctatgataaatggggtgatcattatacg
gagtttgtttcatccaaagaacttaaacgtatatgtgatcatatgccagataaagatgta
cctgatctggatgatgaacaattgttggaattagaaaacttaatatacaaaaaacttaat
cgtaattggttccgtaataaatatgcctatttctatactttcgatgcgcaatcggaaaag
gcaaatttgagttatcaatggcatggtggaaatgttttaaatgatagtaatttaaattcg
gagtcttataagaaaataaattatatttttataaatctcatacaatttgataaaacaaaa
tttttgcattggcttaaggagagattttccgataatttgtcagatttacagattattaat
gtaacatggattttggaatcgcataaagctagaatattgctagatattaatgaatataca
tggcatgatttttaa
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