Lactobacillus crispatus: LCRIS_01167
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Entry
LCRIS_01167 CDS
T01222
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCRIS_01167 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_01167 (nth)
Enzymes [BR:
lcr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LCRIS_01167 (nth)
DNA repair and recombination proteins [BR:
lcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCRIS_01167 (nth)
Prokaryotic type
LCRIS_01167 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
DUF4294
Transposase_20
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CBL50614
UniProt:
D5GXV5
LinkDB
All DBs
Position
complement(1167488..1168117)
Genome browser
AA seq
209 aa
AA seq
DB search
MTEDVLSDEEARRVLKKILALYPDAQGELQWDTNFHLLCAVMLSAQTTDKMVNRVMPSFS
KMFPTPEVLAKAPIEEIEHEIKTIGLFRSKAKHLKATAQILVDKYNGQVPKDKKLLMTLP
GVGEKTANVVLAEGYGVPAIAVDTHVSRISKKFHIVDDKATPHEVEKRLEAILPKSEWIK
THHAMILFGRYTMPARAKGDPYSYLNSEK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagatgtattgagtgatgaagaagcacgtagagttttgaaaaaaattttagca
ttgtatcctgacgcacaaggtgaattgcaatgggatactaactttcatttactttgtgcg
gttatgttgagcgcacaaacgactgataagatggttaatcgtgttatgcctagttttagt
aaaatgttcccaaccccagaagtattagcaaaagctccaattgaagagattgagcatgag
ataaaaactattggtctatttcgttcaaaagctaaacatttaaaggccactgcgcaaatt
ttggtcgataaatataatggacaggttcctaaggataaaaagttattgatgaccttacca
ggggtgggagagaaaactgctaacgttgttttggctgaaggctatggtgtgccagctatt
gctgttgatactcatgtgtcacggatttctaaaaagttccatattgtagatgacaaagct
actccacatgaagtagagaagcgattagaagcaattttacctaaaagtgaatggataaaa
acgcaccatgcgatgattctatttggtcgttatacaatgccagctcgagctaaaggcgat
ccgtattcttatttaaattccgaaaagtaa
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