Lacticaseibacillus paracasei BD-II: LCBD_1687
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Entry
LCBD_1687 CDS
T01955
Symbol
nth
Name
(GenBank) Putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCBD_1687 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_1687 (nth)
Enzymes [BR:
lcs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LCBD_1687 (nth)
DNA repair and recombination proteins [BR:
lcs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCBD_1687 (nth)
Prokaryotic type
LCBD_1687 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AEA57183
UniProt:
A0A0K1MU40
LinkDB
All DBs
Position
complement(1638203..1638892)
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AA seq
229 aa
AA seq
DB search
MKIHPSLAQEEAPFVTDAEAKQLFDQIMALYPDPQPTLHAEDPFQILVAVMLSAQTTDVA
VNAVTPKLFAAYPTPADMAAAPVEAIAAIISRLGLYRTKAAHLKALSDILVKEYAGKVPN
KAADLVRLPGVGKKTATVVLSDAFNIPGVAVDTHVSRIVKGLGLVPQNATPVQIQARLEA
LMPPSEWIKLHRSLIRFGREYLRARDPQVPAGTQWAFLETHYLPLGGKS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcatccatcattagcccaagaggaggcaccatttgtgaccgatgctgaagcc
aaacaactatttgatcagatcatggcactttatcctgatccgcaaccaaccttgcacgcc
gaggatccatttcagattcttgtagccgtcatgttatcggcgcaaacgaccgatgtggcc
gtcaatgcggtcacgccaaagctttttgcggcttatccgacgcctgctgacatggctgca
gcgccggttgaggcgatcgctgcgatcattagccggctaggcctttatcgtactaaagct
gcgcatttgaaagctttgagtgatattttggttaaggaatatgcaggtaaggttcccaac
aaagcggctgacttggtccgtttaccaggcgttggcaagaaaacagccaccgttgtttta
agtgatgcattcaacattccaggtgtggctgtggatacgcatgttagtcgaattgtaaag
gggttgggactcgtcccgcaaaatgcgacaccggttcagattcaggcgcgactggaagcc
ttgatgcccccgtcagaatggattaaacttcatcgcagcctaattcgttttggccgggag
tatttgcgcgcccgtgatccgcaagtgccagcagggacgcaatgggcgtttttagaaacg
cattatttacctttagggggcaaatcatga
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