Lentilactobacillus curieae: PL11_006680
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Entry
PL11_006680 CDS
T04707
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lcu
Lentilactobacillus curieae
Pathway
lcu03030
DNA replication
lcu03410
Base excision repair
lcu03420
Nucleotide excision repair
lcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PL11_006680 (ligA)
03410 Base excision repair
PL11_006680 (ligA)
03420 Nucleotide excision repair
PL11_006680 (ligA)
03430 Mismatch repair
PL11_006680 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcu03032
]
PL11_006680 (ligA)
03400 DNA repair and recombination proteins [BR:
lcu03400
]
PL11_006680 (ligA)
Enzymes [BR:
lcu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PL11_006680 (ligA)
DNA replication proteins [BR:
lcu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PL11_006680 (ligA)
DNA repair and recombination proteins [BR:
lcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PL11_006680 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PL11_006680 (ligA)
MMR (mismatch excision repair)
DNA ligase
PL11_006680 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PL11_006680 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
zf-NADH-PPase
Motif
Other DBs
NCBI-ProteinID:
AQW21633
UniProt:
A0A1S6QJ74
LinkDB
All DBs
Position
1388452..1390482
Genome browser
AA seq
676 aa
AA seq
DB search
MATANMNENSARVQAEELRTKLNKWADEYYTYDAPSVEDSEYDAVYQQLVYLETQYPAII
TPDSPTQKVGDHTLPGFSKVPHDIPMLSLGDVFSEQELADFVDRLTKSDNVNFEYNCELK
IDGLAISLRYEQGKLVQGSTRGNGQIGEDITENLKTIKSIPRKLTRPINIEVRGECYMPK
SSFVSLNEQRQRDGQTPFANPRNAAAGSLRQLDSKETAKRKLSTFMYNVADYDDLLTDTQ
SGLLEELKELGFNTNPSSQVAHSMAEIDAYIDEYQEKRDSLEYGIDGIVIKVNSLPTQRK
LGATVKVPRWAIAYKFPPEEAQTVVRDIEWTVGRTGVVTPTAVMDPVTLAGTTVARASLH
NPDYLNEKGIRIGDTVELHKAGDIIPEISKYIPEKRPADSVAYEIPTQCPSCGSELVHLD
DEVALRCINPKCPAQLAEGLTHFASRNAMNIDGLGPKIIAQLFQKQLVDDVSGLYTLSVQ
DLLTLDKFGEKSATNLISAIENSRENSLERLLFGLGIRHVGAKAARLIAQKFKDIDEIIK
ASAPDIAEIDTMGMIIADSVVTYFSMPESVELIDRLKSVGVNMTYLGETTEEIEGSDSFF
NGKKVVLTGKLQATTRGDATDWLEKHGASVTSSVSKNTDLVVVGADPGSKYDKAVKLDIT
IWDEQQFVSEMNKENQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcaaatatgaatgaaaactcagcgagggttcaagcagaagagctacgaaca
aaattgaataagtgggcagatgagtattatacgtatgatgcccctagcgttgaagattct
gaatatgatgcagtctatcaacagttagtttatttggaaacgcaatatccagccattatt
accccagattctcctactcaaaaagttggagatcatacgctaccagggttcagtaaagtg
ccacatgatatcccaatgttatctttaggagatgtgttctcagaacaggaactagcagac
tttgtggacagactgactaagtcagataacgtgaactttgaatataattgcgaattaaaa
attgatgggctagcaatttctttgcgatatgaacaaggcaagctagtccaaggatctact
agaggaaatggccagattggtgaagatatcaccgagaatttgaagactatcaaatcaatt
ccccgcaaactaacaagaccaatcaatattgaagttcgtggtgaatgttatatgcctaag
tcttcatttgttagtttgaatgaacaacggcaaagggatggtcaaacaccattcgcaaat
cctcgtaacgcagctgctggtagcttacggcagcttgattctaaggaaacggccaagcga
aaattaagtacgtttatgtataacgttgccgattatgatgacttattgactgatactcaa
agcgggctgcttgaagaattaaaggagctaggttttaacactaatccatcttcgcaagtg
gcacattcgatggcagaaatcgatgcgtatattgatgagtaccaagaaaaacgggatagt
ttggaatatggaattgatggaatcgttattaaagttaattcactaccgactcaaaggaag
ttaggcgcaacggttaaagtccctcgctgggcaattgcatataaatttccaccagaagag
gcccagacagtcgttcgggacattgagtggacggttggcagaaccggagtggttacccca
actgccgtgatggatccagtgaccttggcgggaacaactgttgctagggcttcacttcat
aaccctgactatttaaatgagaaagggattcggattggcgatacagtggagctgcataaa
gctggcgatattattccagaaatctcgaaatatattccagaaaaacggccagcagatagc
gttgcttatgaaattccaacccaatgtccatcttgtggttcagagctggttcatctcgat
gatgaggttgccttacggtgcatcaaccccaagtgtccagcacaattggcggaggggttg
actcactttgcttcacggaatgcgatgaatatagatggattaggtcctaaaatcattgct
caacttttccaaaaacaattggttgacgatgttagtgggttatacacattgagtgtgcag
gacttgttaacacttgataaattcggtgaaaagtctgcaaccaacctgattagtgcaatc
gaaaatagtcgtgaaaattctttggaacgattgctatttggtttaggaattcgtcatgtt
ggtgccaaagctgcacggttaattgcccaaaagtttaaagatattgatgagattatcaaa
gctagtgcgccggacattgcagaaattgatacaatgggtatgattattgctgatagcgta
gtaacatacttctcaatgcctgagtcagttgagttgattgatcgacttaaatctgtcggg
gttaacatgacctaccttggtgaaacaactgaagaaatcgaaggttctgattcctttttc
aatggtaaaaaggtggttttaactggaaagcttcaggccacaaccaggggggatgcaaca
gactggttggaaaaacatggtgcatcagtcactagttcagtttccaagaacactgattta
gtggttgtgggagctgatccaggaagtaagtacgataaggctgtcaaactggatataacc
atttgggatgaacaacaatttgtttctgaaatgaataaagagaatcaataa
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