Loigolactobacillus coryniformis subsp. torquens: LC20004_04490
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Entry
LC20004_04490 CDS
T05341
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy00300
Lysine biosynthesis
lcy00550
Peptidoglycan biosynthesis
lcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LC20004_04490
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LC20004_04490
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lcy01011
]
LC20004_04490
Enzymes [BR:
lcy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LC20004_04490
Peptidoglycan biosynthesis and degradation proteins [BR:
lcy01011
]
Precursor biosynthesis
Amino acid ligase
LC20004_04490
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ATO45001
UniProt:
A0A2D1KSC4
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Position
936488..938035
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AA seq
515 aa
AA seq
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MQLQFAEITNLLNEHQLLVKSVIPDAVTPQVSAIAYDSRKSSANSLFFCKGAFKPEYLTA
ARQNGASAYMAEQEFTEGAGLAGFVVTDIQKAMALISAAFYGFPQNDLFIIAYTGTKGKT
TSSYFTHNILKTATNNQTALFSTIDRIVGPRPEQEFKSHLTTPESLDLFHDMRTAVDSGM
THLVMEVSSQAYKKNRVYGLHFDVGVFLNITPDHIGPTEHPNFADYLHCKLQLLVNSRIC
VLNAETDHLNEIYRAAQATSQPEDIYLFAKQDFQPSQALPTIDFRYQSEEADLTASQFKL
YARTNKARALTANGQYELSLPGNFNESNAVAAAITASLAGATTPAIATGLATAYVPGRME
SLQTSNHGTIYADYAHNYASMKALLSFLEGQQPDAKVIVVVGSPGNKGVSRRAGFGKVLT
EYADVAFLTADDPGFEDPLKIAQEIDAHIDHSKVKVTIEVDRKKAIAAAIAASATNDIVV
LAGKGDDAFQKVNGVDTPYPTDMVVAKEIVRGLQA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcagttacaatttgccgaaataactaacttactgaacgaacatcaattactggtcaag
tcagtgatcccggatgcggttacgccgcaagtgagcgccattgcgtatgattctcgtaaa
agtagtgctaactcactttttttctgtaaaggtgccttcaagccggaatacttaacggca
gcacgacaaaatggtgctagcgcctatatggcggagcaagaatttaccgaaggagcaggc
ttagctgggtttgtggttacggatattcaaaaagcgatggcgttgatcagtgccgcgttt
tatggttttccgcaaaacgatctgttcatcattgcttacactggaaccaaagggaaaaca
acctcgagttattttacccataacattttaaaaaccgcgactaataatcaaaccgcattg
ttttcaacgattgatcggatcgtggggccacggccggagcaagaatttaagtcgcattta
acgacgccggaatcattggatctgttccacgacatgcgtacggcagtcgattcggggatg
actcatttggtgatggaggtctcttcacaggcctataaaaagaaccgagtgtatggctta
cattttgatgttggggtctttttaaacattactcctgatcatattggtccaactgaacac
cctaattttgccgattacttacattgtaaattacaactgttagtcaattcgcggatctgt
gtgcttaacgcggaaaccgaccatttaaatgaaatttatcgtgcggcgcaagcaactagt
caacctgaagatatttatttgtttgctaaacaagattttcaaccgagtcaggcattgccg
accatcgattttcgctatcaaagcgaggaagctgatttgacggcaagtcaatttaaatta
tatgcgcgcaccaataaggcccgtgctttaaccgctaatggtcaatatgagttgagtttg
cccggtaattttaacgaaagtaatgcggtggctgcagccatcacggctagtctagctggc
gcaacgacgccagcaatcgcgactggtttagcgactgcgtacgtgcctggtcgcatggaa
tcattacaaaccagcaatcacggcacgatctatgccgactatgcgcataactatgccagt
atgaaagctttgttgagttttcttgagggccaacagccggatgctaaagtgatcgttgtt
gtgggtagtcctggtaacaaaggggtatcgcgccgtgctggctttggtaaagtcttaact
gagtacgctgacgtggcctttttgactgcggacgatccgggttttgaggatcccttaaaa
attgctcaagaaatcgatgcacatattgaccatagcaaagtaaaggttacgattgaagtt
gaccgtaaaaaagcaattgctgcggcaattgcggctagcgctactaatgatattgtcgta
ttagcaggtaaaggcgacgatgctttccagaaggttaatggtgttgatacaccgtatcca
actgatatggtcgttgcgaaagaaatagtgagaggattgcaagcataa
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