KEGG   Leishmania donovani: LDBPK_070240
Entry
LDBPK_070240      CDS       T02289                                 
Name
(RefSeq) cobalamin-dependent methionine synthase, putative
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ldo  Leishmania donovani
Pathway
ldo00270  Cysteine and methionine metabolism
ldo00450  Selenocompound metabolism
ldo00670  One carbon pool by folate
ldo01100  Metabolic pathways
ldo01110  Biosynthesis of secondary metabolites
ldo01230  Biosynthesis of amino acids
ldo04980  Cobalamin transport and metabolism
ldo04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:ldo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    LDBPK_070240
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    LDBPK_070240
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LDBPK_070240
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    LDBPK_070240
   04980 Cobalamin transport and metabolism
    LDBPK_070240
Enzymes [BR:ldo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     LDBPK_070240
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-GeneID: 13391853
NCBI-ProteinID: XP_003858466
UniProt: E9B920
LinkDB
Position
7:83440..87198
AA seq 1252 aa
MSAMHGERSPVFEELEEIFQKRILVLDGGMGTMLQRYKLEEKDFRGEEFKNATKDLKGNN
DLLCLTQPAKVRDVHYKYAIAGADVMETNTFNSQAVSQSDYETQHLVRRINLAAAKICRD
AAEQASRETGRRIFVAGVLGPLNRTASISPSVERPDYRNITYDEIVAAYTEQATALLDGG
VDVLLIETIFDSLNAKAALFAVNTLFEDKGYTRVPIMVSGTITDLSGRTLSGQTVDAFYS
SMRHGNIISIGLNCALGCREMRPYVERLAEISEAYVTCHPNAGLPNAMGEYDELPEDMAR
DIRDFAVNGWVNLVGGCCGTTPDHIRAIATAVKGIPPRLRGQPSETMVISGLEALYFTHH
IGFCNIGERCNISGSLKFKRLVKEGKWEECLAVARQQVEEGAMVLDVNMDDGLIDGVTAM
TRFLNMIASDPEVARVPVMIDSSKFHVIEAGLKCTQGTPIVNSISLKVGEEEFLRQARLI
RRYGAAVVVMAFDENGQAADYASKTRICKRAYDMLVADGFPPENIVFDPNVLTICTGMEE
HNNYAIDFMNAAAWIKANLPRAKVSGGISNLSFSFRGFEAIRMAMHSAFLKKMIADGSLD
MAIVNAGALPVYTDIEPDLLQLVEDAIYNRTPHSSERILEYAERLKAEKASGGGAEEAKV
SKVDEWRNASVEERLSHALIKGIVEFIEDDVEEARTCGKYERPLHIIEGPLMDGMGKVGE
LFGSGKMFLPQVIKSARVMKKAVAVLVPYMEAEKAALMADTNGASTSRAKRVLMATVKGD
VHDIGKNIVGVVLGCNSYEVIDLGVMVSCEKILAAAKEHDVHVIGLSGLITPSLDEMVHV
AKEMKRMGFGIPLMVGGATTSKQHTAVKIQPHYNKTVHVLDASKAVVTVSNMLGSSEEEF
WEEVRETYQEIAEDYLANLKDRVYKPLAFCRENALKIDFVANPPAPRPRKLGTITISDYS
LEMIATRIDWNPFFSVWQVRGTYPNRGFPKLFNCPTVGAEAKRLFDDAQEMLKDIIATRS
FRAKAVVTLMPVNSVGDDIEVYKDDTRNEKIATFFGLRQQSEKERGEPYLCISDFIAPKG
VAPDYLGSLAVGIFGADKMSEQYEKDNDSYRSIMIKALADRFAEAFTEEMHRIIRTDLWG
YAEKETAETVDLIRMQYQGIRPAPGYPSQPDHTEMDTMWRIGEVEERTGVRLSESYAMMP
AASVSALVFAHAQSKYFAVGKIQKDQVKDYAERKGWNLDRAESQLSSSLAYN
NT seq 3759 nt   +upstreamnt  +downstreamnt
atgtcagccatgcatggcgaacgaagccccgtcttcgaggaactggaggagatcttccag
aagcgcatcctcgtgctggacggtggcatgggcactatgctgcagcgctacaagctcgag
gaaaaggacttccgcggcgaggagttcaagaatgccacgaaggatctcaagggcaacaac
gacctgctctgtctcacgcagccggcgaaggtgcgggatgtgcactacaagtatgccatc
gccggcgccgacgtcatggagacgaacacgttcaactcgcaggcggtgagtcagtccgac
tacgagacacagcaccttgttcgtcgcatcaacctcgccgctgcgaaaatctgccgcgac
gcggcggagcaagcaagccgcgagacggggcggcgcatcttcgtcgccggtgttttgggc
ccgctgaaccgaacggcttccatctcgccctccgtcgagcgccccgactaccgcaacatc
acatatgacgaaattgtagccgcttacacggagcaggcgacggccctgctggacggaggc
gtagatgtgctgctgatcgagaccatcttcgactccctcaacgccaaggcggccctcttc
gcggtgaacacactcttcgaggacaagggctacacacgcgttccgatcatggtgagcggc
accattacagacctgtccggtcgcactctcagcggccagacagtggacgccttctactcg
tcgatgcggcacggcaacattatctcgatcggtctcaactgtgccctgggctgtcgcgaa
atgcgcccgtacgtcgaacgccttgcagagatcagcgaggcctacgtgacgtgccacccc
aacgcggggctgccgaacgcgatgggtgaatacgacgagctgccggaggacatggcccgt
gacatccgcgactttgcagtgaacgggtgggtcaacctcgtcggcggctgctgtggtaca
accccagatcacatccgtgccattgccacagccgtgaagggcatcccgccgcgtctgagg
gggcagccgagtgagacaatggtcatcagcgggctcgaggcgctgtacttcacccaccac
atcggcttctgcaacatcggagagcgatgcaacatcagcggctcgctaaagtttaagcgc
ctcgtcaaggaggggaagtgggaggagtgcctggcggtggcccgccagcaggtcgaggag
ggggccatggtgttggacgtgaacatggacgatggcctcatcgacggcgtaaccgccatg
acgcgcttcctgaacatgattgcctctgacccggaggtagcgcgagtgccggtgatgatc
gactcgtccaagttccatgtcatcgaggcgggtttgaagtgcacccagggaacaccgatc
gtcaactcgatctcgctgaaggttggtgaggaggagttcctgcgccaggctcgcctaatt
cggcgctacggtgccgccgtggtggtgatggcctttgatgaaaatggtcaggcggcagac
tatgccagcaagacccgcatctgtaagcgtgcgtacgacatgctggtggcggacggcttc
ccaccggagaacatcgtcttcgacccgaacgtgctgacgatctgcaccggcatggaggaa
cacaacaactacgccatagacttcatgaatgcggcggcgtggatcaaggcaaatctgccc
cgcgccaaggtgagcggcggaatttcgaacctcagcttttccttccgcggtttcgaggcc
attcgcatggcgatgcactccgccttcttgaagaaaatgatcgctgatggaagtctcgac
atggcgatcgtgaacgcgggtgctctgccggtgtacaccgacatcgagcccgatctgctg
cagctggtcgaggatgccatctacaaccgcaccccccactcctcggagcgcattcttgag
tacgcagagcgactcaaggcggagaaagcgtccggcggtggcgccgaggaggcgaaggtg
tctaaggtggacgaatggcgcaacgcctcagtggaggagcgtctctcgcacgccttgatc
aagggcatcgtcgagttcatcgaggatgacgttgaggaggctcgaacttgtggcaagtac
gagcggccgctgcacatcatcgagggtccactgatggatggcatggggaaggttggcgag
ctattcggtagtggcaagatgttcctgccccaggtcatcaagtcggcacgtgtcatgaag
aaggcggtggcggtgctggtgccgtacatggaggctgagaaggcggctcttatggcggat
acgaacggcgcgtcgacctcgcgagcgaagcgggtgctcatggcgaccgtaaagggcgac
gtgcacgatatcggcaagaacatcgttggcgtcgtcctgggttgcaacagctacgaggtg
atcgacctcggtgtgatggtctcgtgtgaaaagatcttggcggctgcgaaggagcacgac
gtacacgtcatcgggctctccggcctcatcacgccctcactggacgagatggtgcacgtg
gcgaaggagatgaagaggatgggcttcggtatcccgctgatggtgggtggggcgacaacg
tcgaagcagcacacggcggttaagattcagccgcactacaacaagacggtgcacgtgctg
gacgccagcaaggccgtggtcacggtatctaacatgctcgggagcagcgaggaggagttc
tgggaggaggtgcgcgagacctaccaagagatcgcggaggactacctggcgaacctgaag
gaccgtgtctacaagcccctcgccttctgccgtgagaacgcgctgaagatcgacttcgtc
gccaacccgccggcgccgcggccgaggaagctcggcaccatcaccatcagcgactactcg
ctcgagatgatcgccacccgtatcgactggaacccgtttttctccgtctggcaggtgcgc
ggcacgtaccccaaccgtggctttccgaagctcttcaactgccccaccgtcggcgcggag
gcgaagcggctattcgacgacgcgcaggagatgctgaaggacatcattgccacccgtagc
ttccgcgccaaggctgttgtcacgctgatgcccgtgaacagtgtcggcgacgatatcgag
gtgtacaaggatgacacacgtaacgagaagatcgccaccttctttgggctgcgccagcaa
tcggagaaagagcgaggcgagccgtacctgtgcatctccgacttcattgccccgaaaggg
gtggcgccagactacctcggcagtctcgctgtcggcatctttggagcggacaagatgagc
gagcagtacgagaaagacaacgacagctaccgctctatcatgatcaaggctctggcagac
cgcttcgccgaggccttcacggaggagatgcaccgcatcattcgcacagacttgtggggc
tacgcggagaaggagacagccgagacggtcgacctgatccggatgcagtaccaaggtatt
cgacctgcccctgggtacccctcgcagccggaccacacggagatggacacaatgtggcgc
atcggcgaggtggaggagcgcacgggggtaaggctgtctgagtcgtacgcaatgatgccg
gcggcatctgtcagcgcactcgtcttcgcgcatgcgcagtccaagtactttgcagtgggc
aagatccagaaggaccaagtaaaggactacgccgagcgcaagggctggaatctagaccgg
gctgagagccagctcagctcgtccttggcctacaactga

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