Leishmania donovani: LDBPK_301390
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Entry
LDBPK_301390 CDS
T02289
Name
(RefSeq) ATP-binding cassette protein subfamily H, member 3, putative
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ldo
Leishmania donovani
Pathway
ldo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDBPK_301390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldo03019
]
LDBPK_301390
Messenger RNA biogenesis [BR:
ldo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
LDBPK_301390
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_28
RsgA_GTPase
AAA_29
AAA_24
VapE-like_dom
ATP-synt_ab
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
13385559
NCBI-ProteinID:
XP_003862852
UniProt:
E9BLN2
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Position
30:462471..463796
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AA seq
441 aa
AA seq
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MIGAPWPPEAVFGNTVDRVASPAPVPERKASIADALHLRLSRFLEKMSWGERRRVQILYG
MLYPATLYLLDECSTDIDVAERRTVLELVRQECEAKDGCCVYATHILDGIEGWATHLLLM
EGGRVVDFKAVEKLTMPLEDYALQFMSKRAHAARGFDAVAAPSLSQGSSAAISTTLSACP
TTSSAAYPTPSTADAPVTYWPRGHADEKRSEIVINCAQLNYKDVFKNLSFQVFRGERVLL
CGGNGTGKSTLLNMLGGKQFFDNRHGSLSVLGKRCYDDMLLNALVSYGGDWWTAVPGGEV
HVREMLQLRTSRAERLREMLAVDIDWDVRHISAGEQKRVQLLLHLLDEKPVVLLDEATTD
LDVYQRHSLLQFLYEESVQRGVTVVYSTHIFGGLEGWANAVVLLDRTMRGVHAVWRASEG
QPISLQRVVDAIVALKAREAF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgattggtgcaccatggccacccgaggcggtgttcggcaacactgtggaccgcgtggcc
tcgccggcgccggtaccagagcgaaaggcgagtatcgccgacgcgctgcacctacgcctc
tcccgcttcttggagaagatgagctggggcgaaaggagacgggttcagatcctttatggc
atgctctaccccgccaccttgtacctcctcgacgagtgcagcaccgacatcgacgttgca
gagcggcgcactgtgctggaactggtacggcaggagtgcgaggcgaaggacgggtgctgc
gtgtatgcgacccacattctcgacggaattgaaggctgggccacccacctgctgctcatg
gaggggggccgtgtggtggacttcaaggcggtggaaaagctcaccatgcccttggaggac
tacgcgctccagttcatgagcaagcgcgcccacgctgctcgcggcttcgacgccgtggcg
gcgccgtcgctgtcgcaggggagttctgcggccatttcaacgacgttgtcagcttgccca
acgacatcttcagccgcctacccaaccccttcgacagccgacgcgccggtcacgtattgg
ccacgagggcacgcggacgagaagcgaagcgaaatcgtcatcaactgtgcgcagctgaac
tataaggatgtgtttaagaacttgtcgtttcaggtgttccgcggcgagcgggtgctgctg
tgcggcggtaacggcactggcaagtccaccttgctgaacatgcttggcggaaagcagttc
tttgacaaccgccacggctctctctccgtgcttggtaagcggtgctacgatgacatgctg
ctgaacgctcttgtcagctacggcggcgattggtggactgccgtgcccggtggggaggtg
cacgtgcgcgaaatgctccagcttcggacctctcgtgccgagcgcttgcgtgagatgctg
gccgtggacatagactgggatgtgcgacacatcagcgctggagagcagaagcgtgtgcaa
ctgctcttgcacttgctggatgaaaagcccgtcgtgctgcttgatgaggcgaccaccgac
ctggacgtttatcagcgccacagcctcctgcagttcctctacgaagagagcgtgcagcgc
ggggtgacagtcgtctactcgacgcacattttcgggggtctagagggctgggccaacgct
gtggtactactggaccggaccatgcgcggcgttcatgcggtgtggcgcgcctctgaaggg
cagcccatctcactgcagcgcgtcgtcgatgcaatcgttgctcttaaggcgcgagaagcc
ttttga
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