Leuconostoc sp. C2: LGMK_00335
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Entry
LGMK_00335 CDS
T01567
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lec
Leuconostoc sp. C2
Pathway
lec03420
Nucleotide excision repair
lec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGMK_00335
03430 Mismatch repair
LGMK_00335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lec03400
]
LGMK_00335
Enzymes [BR:
lec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGMK_00335
DNA repair and recombination proteins [BR:
lec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGMK_00335
MMR (mismatch excision repair)
Other MMR factors
LGMK_00335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEJ30131
LinkDB
All DBs
Position
72904..75153
Genome browser
AA seq
749 aa
AA seq
DB search
MSVEELINGMNDKQAEAVQTTQGPLLIMAGAGSGKTRVLTHRIAHLVQDLNVFPWRILAI
TFTNKAAKEMRERISALLSEDVARDIWVSTFHALAVRILRRDGENIGLSRNFTIIDTSAQ
KTLMKRVISDLNLDTNQYDPRTILGMISNAKNDMLRPRDYAKQADNAFQETVAEIYTAYQ
QELKRAQSVDFDDLIMLTIDLFQSTPEVLTRYQNQFEYLHVDEYQDTNDAQYTIVNLLAK
RSQNLAVVGDADQSIYGWRGANMNNILNFEKDYPTAHTVMLEQNYRSTQNILDAANAVIN
HNNERVPKKLWTQNGKGDKIIYYRAQTERDEANFILSNVQKMREENNMAYSDFAVLYRTN
AQSRNVEESLVKANMPYTMVGGHKFYERKEILDIMSYMNLITNPDNNAAFERVVNEPKRG
LGATSLNRLRELANRLNVSYMTAIDSIELAPEISTKAASKFLVFADMMHDLRQQSEFLNV
TELAELAMTRSGYRQMLAEKSDPDSQARLENLEEFLSVTKEFDEKYRADDPEAVDPMTDF
LGSTALMTDLDDFEEGDGAVTLMTLHAAKGLEFPVVFLIGMEEGIFPLSRSLMDEDLLEE
ERRLAYVGITRAKEKLFLTNAFSRLLYGRTQVNDASRFISEISPELLDSQSAGSVNSSSY
QRAMPFDRKTQMAKATTFQSTPVIKTVSGTTGGDNTSWSAGDKVSHKKWGIGTVVAVTGN
TNDQELKVAFPSEGVKQLLAAFAPITKID
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagaagaactcatcaatggaatgaacgataagcaggctgaggccgtccaaaca
acacaagggccgcttttaattatggccggtgctggatcaggaaaaacacgtgtattaaca
catcgtattgcacatttagtacaagacttgaatgtctttccgtggcgaatattagcaatt
acatttacaaataaggcagcaaaagagatgcgtgaacggattagcgcgttattatcagaa
gatgttgcacgtgatatttgggtatcaacttttcatgctttggctgtgcgtattttgaga
cgtgatggcgaaaatattggcttatcacgtaactttacaattattgatacgagtgcgcag
aaaacactgatgaaacgtgtgatttcagatttgaatttagatacaaatcaatacgacccg
cgtacgattttaggcatgatttcaaatgctaaaaatgatatgcttcggccacgtgactat
gcaaaacaagcagataatgcctttcaggaaacagttgctgaaatctacacggcttaccaa
caggagttaaagcgtgcacaaagtgttgattttgatgacctaattatgttgacgattgat
ttatttcaatcaacgcctgaggtattaacacgctatcaaaatcaatttgaatatctacat
gtcgatgagtatcaagatacaaatgatgcacaatatactattgttaacttattagcgaag
cgctcacaaaatttggcagtcgttggtgatgccgatcagtccatttacggttggcgtggc
gctaacatgaacaatattttgaattttgaaaaagattatcctacagcacatactgtgatg
ttagaacaaaactatcggtcgacgcaaaatatattggatgctgctaatgcagtgattaac
cataacaatgaacgtgtacccaaaaaattatggactcaaaatggtaagggtgataaaata
atctattatcgcgcacaaacagaacgtgacgaagccaatttcattttgtcaaatgttcaa
aaaatgcgcgaagaaaacaatatggcgtacagtgattttgctgtgctgtatcgtactaat
gcgcagtcgcgtaatgtggaagaatcattagttaaggcgaacatgccttatacaatggtt
ggtggtcataaattttatgaacgtaaagaaattctggatatcatgtcgtatatgaatttg
attacgaacccagacaataatgctgcttttgaacgtgttgtcaatgaaccaaaacgtggc
ctaggggcgacatctttaaaccggctacgcgagttggcaaatcgacttaatgtgtcttac
atgactgcaattgacagtatcgagttggcaccagaaatttcaactaaagcagcttctaaa
ttcttagtatttgctgatatgatgcatgatttacgtcaacaatcagaatttttaaatgtc
actgaacttgctgaattggcaatgacacgatctggatatcgtcaaatgttggctgaaaaa
agtgatccagatagccaagcacgtttagaaaacttagaagaattcttgtctgttacaaaa
gagtttgatgaaaagtaccgtgcagatgatccagaagcagttgacccaatgacggatttt
ttgggatctacagcactaatgacagatctagatgattttgaggagggtgatggcgcagtg
acattgatgactttgcatgcagctaagggtctggaatttcctgttgtctttttaattggt
atggaagaaggtatttttccattatcacgttcactcatggacgaagatcttcttgaggaa
gagagacgtttggcgtatgttggtattacacgtgccaaggaaaagctatttttaactaat
gccttttctaggttattatacgggcgcacacaagttaatgatgcgtctcggtttatttca
gaaatttcacctgaattacttgattcacaatctgccggttctgttaattcaagtagttat
cagcgtgctatgccatttgaccgtaagacacaaatggcaaaggccacaacttttcagtca
acgccagtcattaaaacagtgagtggtacgacaggcggagataatacaagttggtcggca
ggtgataaagttagtcataaaaaatggggtattggtacagttgttgctgttactggtaac
acaaatgaccaagaactaaaagtcgccttcccgtcggaaggtgtcaaacaattattagcg
gcgtttgctcccattacgaaaattgattaa
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