Leuconostoc sp. C2: LGMK_01230
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Entry
LGMK_01230 CDS
T01567
Name
(GenBank) exodeoxyribonuclease V, alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lec
Leuconostoc sp. C2
Pathway
lec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LGMK_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lec03400
]
LGMK_01230
Enzymes [BR:
lec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LGMK_01230
DNA repair and recombination proteins [BR:
lec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LGMK_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
OB_YrrC
HHH_RecD2
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
SLFN-g3_helicase
AAA_12
AAA_22
AAA
HHH_5
AAA_16
UvrD_C
NPHP3_N
nSTAND3
DUF815
AAA_28
UvrD-helicase
AAA_5
AAA_29
DUF5832
NTPase_1
TrwB_AAD_bind
NACHT
RsgA_GTPase
TsaE
DAO_C
Motif
Other DBs
NCBI-ProteinID:
AEJ30308
LinkDB
All DBs
Position
260015..262402
Genome browser
AA seq
795 aa
AA seq
DB search
MTYQEQQLEKITGTLQNVIFASSDSYFKILSVQIDDSTLENWDETEIIATGTFADVQEGS
VYAFYGSVVRHPKYGQQFKVTRYENELPPDENGLIKYFTSGQFSGIGKKTATKIVEHLGL
NAVNLILDDVHVLDGIVKEPTAKKLMRSLQLNLGLERLFQVGSQFGMGADMAGRLYDQYG
SEAETILNQDPYRLVFEFDGMSFRMADMIGQKIGINRTNERRVQAAVYATITTMSYQYGH
TYLTREKLIQSSVKLIRDFNAEVIVSQAIDHLLADKILVEEDQCLYAATLYLSEIQTAND
LNRLLDASLPFKLSEQAIDDAFITPGQLVLDKTQIAAVKAGLNAQVFLLTGGPGTGKTTI
VRAVVATWHKLLQAQAKYADNTTDFLKSYAVKMASPTGRAAKRMTEVTGYDATTIHRLLG
ISDLDEPEFNADNPITGGLLVVDEASMLDIELTAKLLAAIPNGMKLMIVGDSDQLPSVGP
GNVLADLVDSGKIAHIELDTIYRQGRGSSITTLAQHIKRGELPTDFMENQQDRSTFMVSH
DQTDQAIKQVVQAAVKKGYTQDDLQILTPIYKTTSGVNALNTMAQELFNPAKPAQKSLQF
GTTIFRKGDKILQLENDSERDIYNGDMGKIIAVQYKNDKSNNDHEDRLIVDFDGKEMSYP
KKDLNQLTLAYATTVHKAQGNEFKVVVMALTTRFGLMLNRNLLYTGITRAKEALILVGEY
EAFLHAAQTPVPMRSTRLKARLQNQVVVSSQVSVNSPNVEPKAARNHLTVEMIQSNDISP
LIGLNGITPYDFMPS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgacatatcaagaacaacaattagaaaaaatcactggtacgttacaaaatgttattttt
gcatcgtcagattcttattttaaaatattatcggttcaaattgacgattcaacgctcgaa
aattgggatgaaacggaaattattgcaacaggtacgtttgctgatgtacaagaaggcagt
gtttatgctttttatggttcggttgttcggcatccaaagtatgggcaacagtttaaagtc
acgcgttatgaaaatgagttaccgcctgatgaaaatggtctaattaagtattttacgagt
ggccaattttctggtattggtaagaaaacagcaactaaaattgttgagcatctgggcttg
aatgctgttaaccttattttagacgatgtacacgtgttggatggtattgttaaagagccc
acggccaagaaattaatgcgaagtctacaattgaatttaggactagagcgattatttcaa
gttggtagccagttcggcatgggtgcagatatggcaggtcgtttatacgatcagtatggt
agtgaagcagaaacaattttgaatcaagatccttatcgccttgtgtttgagtttgatggc
atgtcatttagaatggcagatatgattggtcaaaaaattggtattaatcgtacaaatgaa
cggcgtgtgcaggctgcagtttacgctacaataacaacaatgagctatcagtatggtcat
acttatcttacacgtgaaaaactgatacaatcaagtgtcaagttaattcgagatttcaat
gctgaagtgattgtgtcacaagctattgatcacttgttggcagataaaatcttggtagaa
gaagatcaatgcctttatgctgctacgctatatctttcggaaattcaaactgctaatgat
ttgaatcgcttgttagatgctagtttaccatttaaattgtcagagcaggctattgatgat
gcatttataacacctgggcaactcgtattagataagacgcagattgctgcagttaaagct
ggattaaatgcgcaagttttcctattgactggtggtccaggcactggtaagacaacaatt
gtacgcgctgttgttgcgacttggcataaattgttgcaagcgcaagcaaaatatgctgat
aatacaacagactttttaaagtcctatgctgtaaaaatggcatcaccaacagggcgcgcc
gccaagcgtatgacggaagtcacaggttacgacgcgaccacgattcaccggttgctcgga
atatcagatttagatgaaccagaatttaatgccgataatcctattacaggcggcttactg
gtcgttgatgaagcttcaatgcttgatattgaattaacagcgaaattactagcggctata
ccaaatggcatgaaactcatgatagttggtgactcagaccaactaccttcagttggtcca
gggaacgtcttagctgatcttgtggatagtggtaaaatagcgcatattgagcttgatacc
atttatcgtcagggcaggggcagcagtattacaacactagcccaacatattaagcgtggt
gaattaccaacagatttcatggaaaaccagcaagatcgatcaacttttatggtgtcacat
gaccaaactgatcaagcgattaaacaagtcgttcaagcagccgttaaaaagggttatacg
caggatgatctacaaatattgacacctatttacaagacaacatcaggtgttaatgcactt
aataccatggctcaagaacttttcaacccagctaagccagcccaaaaatcactccaattt
gggacaacgatttttcgcaagggtgataaaatattacaattagaaaatgatagtgagcgt
gatatttataatggtgatatgggtaaaattattgctgtccaatataaaaatgataaaagc
aacaatgatcatgaagatcgtctaattgtagattttgatgggaaagagatgagttaccca
aaaaaggatcttaatcaattaactttggcgtatgccacgaccgttcataaagcccaaggt
aatgaatttaaagtcgttgttatggccttaactactagatttggactgatgcttaatcgt
aatttattatacactggtatcactcgggctaaagaggctttgattttagttggcgaatat
gaagcgtttcttcatgccgcgcaaacgcctgtgccgatgcgttcaacaagattaaaggca
cgattacaaaatcaagtggttgtgtcatctcaagtaagtgttaatagcccgaatgtcgaa
cccaaagcagctaggaatcatttaacagttgaaatgattcaatcaaatgatatttcacca
ttgattggtttaaatggcatcacgccttacgattttatgccaagttaa
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