Leuconostoc sp. C2: LGMK_03740
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Entry
LGMK_03740 CDS
T01567
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lec
Leuconostoc sp. C2
Brite
KEGG Orthology (KO) [BR:
lec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lec03019
]
LGMK_03740
03009 Ribosome biogenesis [BR:
lec03009
]
LGMK_03740
Enzymes [BR:
lec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LGMK_03740
Messenger RNA biogenesis [BR:
lec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LGMK_03740
Ribosome biogenesis [BR:
lec03009
]
Prokaryotic type
rRNA helicases
LGMK_03740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
DUF7627
Motif
Other DBs
NCBI-ProteinID:
AEJ30806
LinkDB
All DBs
Position
complement(764935..766302)
Genome browser
AA seq
455 aa
AA seq
DB search
MAEIANQFGQFNLSPEIITALTAIGFTKPTPVQAKLIPSILKGNDVVGQSQTGSGKTHTF
LIPIFNQLEQNKAYAQAVITTPSRELAAQITKAAKDFSEQWHQDAIISEFVGGTDKLRQI
KQLEKGQPQIVIGTPGRIKDLVASGALKLHAVKTFVVDEADMTLDMGFLNEVDFIAGVMP
ANLQTLVFSATMPEKLKPFLKKYLDNPQFEAIPVSTVIADTIDNWLLATKSKDKNDVIYQ
VLTIGNPYLALVFANTKDRAKEIVSNLRGRGLKVAEIHGDIEPRERRRVMKAIQSLEYQY
VVATDLAARGIDITGVSHVINDDIPEELEFFVHRVGRTGRNGLPGLAITLYGPDEENEVE
ELEALGINFKAKQIKDNEIVDIKDRRARKQRVATTRKLDPTMVGMVKKKKKIVKPGYKRR
IKKALQRKDQMDRRISKREDMRAIRKENKKRGDNQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaattgcaaaccaatttggacaatttaatttaagtcctgaaattattaccgct
ttgacagccattggctttacaaagccaacgcctgttcaggcaaaacttatccctagtatt
ctgaagggtaatgatgttgttggacaatcacaaactggatcaggaaaaacacacactttt
ttgattccgatatttaatcaattagaacaaaacaaagcatatgctcaagctgttataaca
acgccatcacgtgaattagctgcacaaattacaaaagcagccaaagatttttcagaacag
tggcatcaagatgctattatttctgaatttgtaggcgggaccgataaattacgtcaaatt
aagcagcttgaaaaagggcaaccacaaattgtgattggtacaccgggtcgtattaaagat
ctagttgcttcgggtgctctaaaattgcacgccgtaaagacttttgtcgttgatgaagct
gatatgacgttagacatgggattcttgaacgaagtagattttattgctggtgtgatgcca
gcaaatttgcaaaccctagtctttagtgccacgatgcccgaaaaattgaaaccatttcta
aaaaaatatttagataatccacaatttgaagcaattcctgtatcaacggtcattgcggat
acaattgataactggttgttagcaacgaaatctaaagataaaaacgatgtgatctatcaa
gtattaacaatagggaacccttatttagccttagtttttgctaatacaaaagatagagca
aaagaaattgtttctaacctacgtggtcgcggtttaaaagttgcagaaattcatggtgat
attgaaccacgagaacgacgtcgtgtgatgaaagctattcagagtttggaatatcaatat
gttgtggcaactgatttagcagctcgaggtattgatattactggtgtatcacatgtaatt
aatgatgatattccagaagaattagagttttttgtccatcgtgttggccgaacaggccgt
aatgggttacctggtctggcgattacactgtatggtccagatgaagaaaatgaagttgaa
gaattagaagctttgggtattaattttaaagctaagcagattaaagataacgaaattgta
gatattaaggatcggcgtgctcgtaaacaacgtgtagcgacgactcggaaacttgatccg
acaatggtaggtatggttaaaaagaagaagaaaattgtgaagccaggctataaacgtcgt
atcaaaaaggcacttcagcgtaaggatcaaatggatcgacggatttcaaaacgagaagat
atgcgtgcaatacgcaaagaaaataaaaaacgtggtgataatcaataa
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