Leuconostoc sp. C2: LGMK_05735
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Entry
LGMK_05735 CDS
T01567
Name
(GenBank) DNA helicase (putative)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lec
Leuconostoc sp. C2
Pathway
lec03420
Nucleotide excision repair
lec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGMK_05735
03430 Mismatch repair
LGMK_05735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lec03400
]
LGMK_05735
Enzymes [BR:
lec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGMK_05735
DNA repair and recombination proteins [BR:
lec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGMK_05735
MMR (mismatch excision repair)
Other MMR factors
LGMK_05735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
DEAD
AAA_30
PhoH
AAA_16
NACHT
SLFN-g3_helicase
Ribosomal_60s
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AEJ31204
LinkDB
All DBs
Position
complement(1176284..1178647)
Genome browser
AA seq
787 aa
AA seq
DB search
MDNQIKIDETQYLDGTLQAMEKSLVATAAEIKQTNKSIDSVAQNWSDVRLKTDTYSGIVE
TAASIRQQQQMLSERENSKTRAERRVATLTKQIEKPYFARIDFSETTSQDREAETIYIGL
GSFSNDKNQFLVYDWRAPVASIYYDGGIGKVSYLTPDGTQQANVTLKRQFQIEDGVIVTL
FDTEEAIGDAMLMNALSGESSTKMKSIVTTIQKEQNKIIRNTEADLLFVQGAAGSGKTAA
VLQRVAYLLYRYRGKLTSGQVVLFSPNQLFNDYIDNVLPELGEQNMVQMTFYQYASRRLP
KIAVETLQERFEHDKTADNINRAKGSLAMFHAVTAYAEHLNQTDMKIRNLMFRGEPLISK
ARISEIYYQYNENYKLGQRLEATRDTLMRILSAHIGQELRKDWVELAIENLSKQEYDELV
GAGQVRVGDNEESDAAARTRQVQLGEGPKEREFASEKAERHFLAKQIVTQSLKPLARQIR
RANFLNINAQFIDFLRHAHHYFDLKAFNITETGWLAHVETIITALKQKQLSLTDTTLYLY
LYDLMTGKKGERDIRFLFIDEIQDYTPFQLAFLKFSFPKAKFTVLGDLNQAIFTKDNATR
LQDDFSSLFDPERIEQVKLTQTYRSTQQITDFTKYILRDGQDIDAFNRDGDKPMVYTLLS
ESDMLVKLQQQLTQHTLNHDTTAIITKTRDDAQQLAAQLDSQSVTLIQSENQRLAKGAII
VPSYLAKGLEFDAVIIWHADNTRYGDDSERRLLYTVASRAMHTLTLLAEKRATQLLDDVP
AHLYEVN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
ttggacaatcaaattaaaattgacgaaacgcagtaccttgatggaacactacaggcgatg
gaaaaatcgcttgtggcaaccgcagcggaaattaaacaaacaaacaaaagtatcgactcc
gttgcacaaaattggagcgacgtgcgattaaaaacggatacctattcaggcattgttgaa
acggcagcgtcaattcgtcagcagcagcaaatgttatctgagcgtgaaaactctaaaacg
cgtgcagagcgtcgtgtggcgacattaacgaaacaaattgaaaagccttatttcgcaaga
attgactttagtgaaaccactagtcaagatcgcgaagcggaaacaatttatattgggttg
ggatcatttagtaacgataaaaatcagtttttagtctatgattggcgcgctccggttgct
tcaatctattatgatggtggcattggaaaagtatcctatttgacaccggacggtacgcaa
caggcaaatgtcacgcttaaaagacaattccaaattgaagatggtgtcattgtgacacta
tttgatacagaagaagctattggcgatgcgatgttgatgaatgccttatcaggtgaatca
tcaaccaagatgaagtcaattgtgacaacgattcaaaaagaacaaaataaaattattcgt
aatacagaagctgatttattatttgttcaaggcgcagcaggttcaggtaaaacagctgct
gtactacagcgtgtagcttatttattatatcgttatcggggtaaactaacttctggtcaa
gtcgttttatttagtccaaatcaattatttaatgattatattgataatgtgttaccagag
ctgggtgaacaaaatatggtacagatgacattttatcaatatgcttcacgtcgtttgcca
aaaatagctgttgaaacgttacaagaaagatttgagcatgacaagactgccgacaacatt
aatcgtgcaaagggcagtttggctatgtttcatgcggtaactgcttacgcagaacatttg
aatcaaacggacatgaaaattcgaaatctcatgttccgtggcgagcccctaatttctaaa
gcacgtatttcagaaatctattaccaatacaatgaaaattataaattaggtcaacgatta
gaggcaacgcgtgatacattgatgcggatattgagcgcgcatattggtcaggaattgcgt
aaagattgggtagaattagccattgaaaatctttccaagcaagaatatgatgaactggtt
ggtgctggtcaagtgcgtgttggtgataatgaagaatctgatgcagccgcgcgtacacga
caagtccaactaggagagggaccaaaagaacgtgaatttgccagtgaaaaagcagaacgc
cattttcttgcaaaacaaattgtgacccagtcgttaaaaccgctagcacgtcaaatccgt
cgtgcaaattttctaaatattaatgcgcaatttattgattttttgcgtcatgcccaccat
tattttgatttaaaagcgtttaacataacagaaactggttggttagcgcatgtcgaaaca
attattacggcattgaaacagaagcaattatcgttgacggatacaacgctatatttatac
ctatacgatctgatgactggtaagaaaggtgagcgtgatattcgttttctgtttattgac
gagattcaggattacacaccatttcaattggcatttttgaaatttagtttcccaaaggca
aaatttaccgtgttgggtgatctcaaccaagctatttttacaaaagataatgcaacgcgt
ttgcaggatgatttttcatcgttgtttgaccctgaacgcatcgagcaggttaaattgaca
caaacttatcgttcaacacaacaaataacagatttcacaaaatatattttacgtgatgga
caggatattgatgcgtttaatcgtgatggtgacaaaccgatggtatatacgttattaagc
gaatcagacatgttggttaaactacagcaacaattaacgcaacatacgttaaaccatgat
acgacagcaattattacgaagacacgtgatgatgcgcaacaattagctgcgcaacttgac
agtcaatcagtcacattaattcagtcggaaaaccaacgcctagccaagggcgcgatcatt
gtgccctcttatttagcaaaggggttggaatttgatgctgtgattatttggcatgctgac
aatacacgttacggggatgattcagaacgacgcttgctatatacagtagctagtcgtgcc
atgcatacattgacgttattagctgaaaaacgtgcaacgcaattacttgatgatgtgcca
gcacacttatatgaggtaaactaa
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