Leuconostoc sp. C2: LGMK_05955
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Entry
LGMK_05955 CDS
T01567
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lec
Leuconostoc sp. C2
Pathway
lec00040
Pentose and glucuronate interconversions
lec01100
Metabolic pathways
lec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LGMK_05955
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGMK_05955
Enzymes [BR:
lec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LGMK_05955
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
DUF2436
DNA_pol3_a_NII
Motif
Other DBs
NCBI-ProteinID:
AEJ31248
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Position
1219174..1220463
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AA seq
429 aa
AA seq
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MTKTRHKQHIIVAFTIGITALGLTSCINAATIPTSLQKNSREVANASQGFAAGTTGGSKA
DAAHTYQVTNRIELLNALGNETNKTNKIIYVSGTINMNVDNNSKALTANNYANGTGYNLA
AYLKAYDPSTYGKKLPTGSQETARNKAQKNQAKQVQYKIPSNTTIIGNSNAKITGGNMII
NSQNVIVRNIIFENAYDFFPQWDPTDGTSGNWNSQYDNLTVTGGSHVWLDHNRFFDGTQT
DNQNGSYYGREYQHHDGLVDIVNGATNVTLSYNALQNHDKSMNIGNSDSKTTDAGKLRVT
MHHNRFDNLVQRQPRVRFGQVHMYNNYYSATNTSIYKFMYAFGVGKQSQIYAQNNIFDIP
NLATKNIAKVFGGSNFTDSGTLLNGQKVTGIATSNKLSPASWTPQYKNMLQDPAAAKTAV
ISSAGPTLK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaagacataagcaacatattattgttgcatttaccataggcatcacagca
ctcggcctaacttcttgcattaatgcagcaaccattcctaccagtttgcaaaaaaattca
cgagaggtggcgaacgcttcacaaggatttgctgctggcacaacaggtggtagcaaagct
gatgctgcacatacttaccaagtaactaatcgtatcgaattacttaatgcattaggtaat
gaaacaaataagacaaataaaatcatttatgtttctggtacgataaatatgaacgttgat
aataatagcaaagctttaacagctaataactacgccaacggcacaggttataatctagct
gcttatctaaaagcctatgatcccagtacttatggtaaaaaattacctactggatcacag
gaaacggcgcgcaataaagcccaaaaaaatcaagctaagcaagtccaatacaagataccg
tccaacacaacaattattggtaatagcaatgctaaaattacaggcggtaatatgatcatt
aatagtcaaaatgtcattgtccgtaacatcatatttgaaaatgcttatgatttttttcca
caatgggacccaactgatggcacgagtggtaactggaattcacaatacgataatttaacc
gtcactggtggatcacatgtctggttggatcacaatcgtttttttgacggtacacaaact
gacaatcaaaacgggtcatactacggtcgtgaataccaacaccatgacggtttagtggat
attgtaaatggcgctactaacgttaccctttcatataatgcactgcaaaatcatgataaa
tcaatgaatattggtaatagtgatagtaaaaccactgatgcaggtaagctacgtgtaaca
atgcatcataatcgctttgacaatttagttcagcgccaaccgcgtgtccggtttggacaa
gttcacatgtataataactactattcagcaaccaacacgtcgatttacaaattcatgtac
gcttttggtgttggtaaacagtctcaaatttatgcacaaaataatatttttgatatacca
aacctcgcaactaaaaacattgcaaaagtatttggcggatccaatttcacggatagtggc
actttgttgaatggtcaaaaggtaaccggcatagcaacaagcaataaactaagccctgca
tcttggacaccacaatacaaaaacatgttgcaagaccctgccgctgctaaaacggcagtc
ataagtagcgccggcccaacgttaaaataa
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