Leuconostoc sp. C2: LGMK_06510
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Entry
LGMK_06510 CDS
T01567
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lec
Leuconostoc sp. C2
Pathway
lec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGMK_06510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lec03400
]
LGMK_06510
DNA repair and recombination proteins [BR:
lec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGMK_06510
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LGMK_06510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
AAA_21
AAA_22
nSTAND3
AAA_25
DnaJ_CXXCXGXG
AAA_23
AAA_33
AAA_14
AAA_18
ATPase
Viral_helicase1
APS_kinase
SLFN-g3_helicase
cobW
NACHT
MMR_HSR1
ATPase_2
NB-ARC
DUF87
RNA_helicase
NTPase_1
DAP3
AAA_24
PRK
Septin
T2SSE
MeaB
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AEJ31354
LinkDB
All DBs
Position
complement(1327007..1329877)
Genome browser
AA seq
956 aa
AA seq
DB search
MAKTNIEIRGARVQNLKNIDVDIPKDKLTVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSNNPRSTVGTVTEINDYFRLLYARVGRP
DDPKDGTKIMVTVDQMVTYIFDHLALGVRLLVFAPVITAKRGSHETAFDSMRKQGYIRAR
VDGEVLELDTQDLKLDKNKAHDIEVMIDRIVLRNDSRSRLYDSIEAAVRLTGGLVQLDVV
TRDGEEQVAPLKFSDHYLGKLKDFRVGRLEPRLFSFNAPLGACPVCQGIGVTREVDIDLV
VPDESKTLREGAISPWNPISSNYYPEMLRQFSEQNGIDLDTPFESLPKVHRDLILDGSGN
QDFHFHYQNDFGGVRDVDVPFEGVISNVARRFNETNSDYTRDQMAKYMTELTCQSCHGYR
LNSAALSVKINGYHIGEVSEMPVDQELTFFDDVKLGEQDTAIATPILKEIKDRLGFLESV
GLKYLTLSRAARTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDMLLESMHR
MRDLGNTLVVVEHDEDTMLAADYLIDVGPGAGELGGKIVATGTPATVAKNKNSLTGQYLS
GQKFIPVPVTRRKGNGNYITIKGAKENNLKNVTVKFPLGKFVAVTGVSGSGKSTLVNQIL
KRALKQKINNNSEKPGKYRSIEGVENIEQIVDIDQAPIGRTPRSNPATYTGVFDDIRDLF
AQTNEAKMRGYNKGRFSFNTKGGRCENCRGDGVIKIEMNFLPDVYVTCEVCHGTRYNSET
LEVLYKNLNISQVLDMSASDALEFFAPIPKIARKLQTINDVGLGYIRLGQSATTLSGGEA
QRMKLASELHRRTNGKTMYILDEPTTGLHVDDIARLLIVLQRLVESGNTVIVIEHNLDVI
KSADWLIDMGPEGGEGGGNVLVSGTPEKVTKNEKSYTGKYLNAIMARDINRANTQS
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaactaatattgaaatacgtggcgctcgcgtccaaaatttaaaaaatattgat
gtagatattcctaaagacaaattaacagttgtgactggcttatcaggatcaggcaagtca
tcccttgcctttgatacgctttatgccgaaggacaacgacggtacgttgaaagtctttca
tcttacgcgcgtcagtttctaggccaaatggacaagccagatgttgactctatcgatggg
ttatcaccagctatctctattgaccaaaaaacgacttctaataatccgcgttctactgta
ggtacagttactgaaattaatgattattttcgattactttatgcgcgtgttggtcgaccg
gatgatcctaaagatggcactaaaattatggtgactgttgaccaaatggtcacctatatt
tttgatcatttagcgcttggtgtgaggttgttagtgtttgcgcctgtcattacagcaaaa
cgtggttcccatgaaacggcgtttgatagtatgagaaaacagggatatatccgtgctcgt
gttgatggtgaagttttggaactggatacacaggacttaaaattggacaaaaataaggca
catgatatcgaagtgatgattgatcgtattgtgttgcgtaatgattcgcgttcacggctt
tatgactcaattgaagcagctgtgagactaactggcggtttagtccagttagatgttgtc
acacgtgatggcgaagaacaagttgctccgcttaagttttctgatcactatctaggcaag
ttaaaagattttcgtgtcggccgtttagaacctagattatttagttttaatgcgccattg
ggtgcatgcccagtttgtcagggcatcggtgtgacaagagaagtggatattgatttggtt
gtgccagatgaatctaaaactttacgtgagggtgccatttcaccatggaatccgatatca
tctaattattatccagagatgttacgtcaattttcagaacaaaatggcattgatttagat
acaccattcgaatcattacccaaagtgcatcgtgatctaattcttgatggttcaggaaat
caagattttcattttcactaccaaaatgattttggtggcgtccgtgatgttgatgttcct
tttgagggtgtcattagtaatgtggcaagacgttttaatgaaactaattcggattacaca
cgtgatcaaatggctaaatacatgacagagctgacttgccaatcatgccatggctatcgg
cttaactcagcggcattatcagtaaaaatcaatggttatcatattggtgaagtatctgaa
atgcctgttgatcaagaattaacattttttgatgatgttaagctcggggaacaagacaca
gcaattgcgacaccaatccttaaagaaattaaagatcgtttaggctttttagaaagtgtt
ggtctaaaatacctgaccttgtcgcgcgcagcacgtacgctttctggtggtgaatcacaa
agaatccgtttagcgactcaaattgggtcaaatttgtccggagtattgtatgtgttagat
gaaccatcaattggcttacaccaaagagataatgatatgctgctagaatcaatgcatcgt
atgcgtgatttgggcaatacattggttgttgtggaacatgatgaagatacgatgttagca
gcagattacttaattgatgttggtccaggtgctggtgaattaggcggtaaaattgttgca
acagggacaccagcaaccgttgcaaaaaataaaaattcattgactggtcaatatttatct
ggtcaaaaatttattcctgtgccagttactcgtcgcaaaggtaacggtaattacatcaca
attaaaggtgccaaagaaaataacctcaaaaatgtcaccgtgaaatttcctttgggtaag
tttgtggcagtaactggtgtttctgggtcagggaaatcaacgcttgtcaatcaaatttta
aaacgtgctctcaaacaaaaaattaataataattcggaaaagcctggtaaatatagaagc
attgaaggtgttgaaaatatcgaacaaattgtcgatattgatcaagcaccaatcggtcgg
acgccacgttctaaccccgctacctacactggtgtatttgatgacattcgtgatttgttc
gcacaaactaacgaagctaaaatgagaggatataacaagggacgtttctcatttaataca
aaaggtggacgttgcgaaaattgtcgtggtgatggtgtgattaagatagaaatgaacttt
ctaccggatgtctatgtcacatgtgaagtgtgtcatggaacacgttataattctgaaacc
ttagaggtattgtataaaaatttaaatatttcccaagttttggatatgtcagcttccgat
gcattagaattttttgcgccaattcctaaaattgcgcgtaaactacaaactattaatgat
gtcgggttgggttatatcagattaggtcaatctgctacaacgttgtccggcggtgaagcg
caacgcatgaaattggcttcagaattgcatcgacgtacaaatggtaaaaccatgtatatt
ctagatgaaccaacaactggtctacatgttgatgatattgcccgtttgcttattgtatta
cagcgattggttgaatcaggaaatactgtgattgttattgaacataatttggatgtgatt
aaatctgctgattggctgattgacatgggaccagaaggcggtgaaggcggtggaaatgtt
ttggtatctggtacaccagaaaaagtcactaaaaacgaaaaatcatatactggaaaatat
ttaaatgcaattatggcaagagatattaatcgtgctaatacccaaagctag
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