KEGG   Lentzea guizhouensis: BBK82_21325
Entry
BBK82_21325       CDS       T04448                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
led  Lentzea guizhouensis
Pathway
led03030  DNA replication
led03410  Base excision repair
led03420  Nucleotide excision repair
led03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:led00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBK82_21325
   03410 Base excision repair
    BBK82_21325
   03420 Nucleotide excision repair
    BBK82_21325
   03430 Mismatch repair
    BBK82_21325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:led03032]
    BBK82_21325
   03400 DNA repair and recombination proteins [BR:led03400]
    BBK82_21325
Enzymes [BR:led01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BBK82_21325
DNA replication proteins [BR:led03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BBK82_21325
DNA repair and recombination proteins [BR:led03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BBK82_21325
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBK82_21325
   MMR (mismatch excision repair)
    DNA ligase
     BBK82_21325
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BBK82_21325
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia HHH_5 Zn_ribbon_TFIIB Mut7-C HHH
Other DBs
NCBI-ProteinID: ANZ38229
UniProt: A0A1B2HKH7
LinkDB
Position
4274949..4277099
AA seq 716 aa
MSCPELSDLVTKLVDVTSESLEDVPAAVRERHAVLAEEVRSHQFRYYVLDDPIVTDGEFD
AVLKELEALEADHPGLATPDSPTQLVGGTFSTEFRAVDHLERMLSLDNVFAQDELAEWFK
RVERDAGAGTHFLCELKIDGLAINLLYEKGKLTRALTRGDGRTGEDVTLNVRTIADVPHT
LKGSAEYPVPDLVEVRGEVFFAVEDFLALNASLVEQGKPPFANPRNTAAGSLRQKDPKVT
ASRKLRMICHGIGKTEGFAVARQSLAYEALREWGLPVSSHTKVLTDPAEVARHVEHWGEH
RHDAVHEIDGVVIKVDEVSLQRRLGTTSRAPRWAIAYKYPPEEATTTLLDIQVQVGRTGR
VTPFAVMEPVKVAGSTVARATLHNGSEVKRKGVLIGDRIVIRKAGDVIPEVLGPVLAARP
ADAREFEMPTRCPECNAELRPMKEGDVDIRCPNAETCPGQLRERLAYLASRSALDVEVLG
YEAAAAIAASTAYTNEADLFDFDAESLRQVERFVTVKGELSTNALKLLDNLEAAKSRPLW
RVLVALSIRHVGPTAARALAQQFGSMDAILAADEEVLAGAEGVGPTIAAAVVEWRETGWR
QEVVRRWAAAGVRMEDERDASIVRTLEGLSIVVTGSLTDFSRDSAKEAILARGGKAAGSV
SKKTSFVVVGDSPGSKYDKAVSLKVPVLDEAGFRVLLDSGPDAAREVALNPEEEAS
NT seq 2151 nt   +upstreamnt  +downstreamnt
ctgagctgcccggaattgtcggacctggtcactaagctcgtggacgtgaccagcgagagc
cttgaagacgttcctgcggcggtccgcgagcggcacgccgtgctcgcggaggaggtgcgc
tcgcaccagttccgctactacgtgctggacgacccgatcgtcaccgacggtgagttcgac
gcggtgctcaaggagctggaggcactcgaggccgaccaccccggcctggcgacgccggac
tcgccgacccagctcgtcggcggcacgttctcgaccgagttccgcgctgtggaccacctg
gagcggatgctcagcctggacaacgtgttcgcgcaggacgagctggccgagtggttcaag
cgcgtcgagcgggacgcgggcgcgggcacgcacttcctgtgcgagctgaagatcgacggt
ctggccatcaacctgctctacgagaaggggaagctgacccgcgcgctcacgcggggcgac
ggccgcacgggtgaggacgtcacgctgaacgtccgcacgatcgccgatgtgccgcacacc
ctgaagggctcggcggagtacccggtgccggacctggtggaggtccgcggcgaggtgttc
ttcgcggtggaggacttcctggcgctcaacgcctcgctggtcgagcagggcaagccgccg
ttcgcgaacccgcgcaacacggcggcggggtcgttgcggcagaaggacccgaaggtcacc
gcctcgcgcaagctgcggatgatctgccacggcatcggcaagaccgagggcttcgcggtc
gcccggcagtcgctcgcctacgaggcgttgcgggagtggggcctgccggtctcctcgcac
accaaggtgctcaccgatcccgccgaggtcgcgcggcacgtcgagcactggggcgagcac
cggcacgacgcggtccacgagatcgacggcgtggtcatcaaggtcgacgaggtctcgctg
cagcgccgcctgggcacgacgtcgcgggccccgcgctgggcgatcgcgtacaagtacccg
ccggaggaggccacgaccacgctgctcgacatccaggtccaggtgggccgcaccggccgc
gtcacgccgttcgcggtgatggaaccggtgaaggtggccgggtcgacggtcgcgcgggcc
accctgcacaacggctcggaggtcaagcgcaagggcgtgctgatcggcgaccggatcgtc
atccgcaaggcgggcgacgtgatcccggaggtgctcggcccggtgctggccgcgcgcccg
gccgacgcgcgcgagttcgagatgccgacgcggtgccccgagtgcaacgccgagctgcgc
ccgatgaaggagggcgacgtcgacatccggtgcccgaacgccgagacgtgccccggtcag
ctgcgggagcggctcgcctacctcgcgtcgcggtccgctctggacgtcgaggtgctcggc
tacgaggccgccgccgcgatcgccgcgtcgaccgcgtacacgaacgaggccgacctgttc
gacttcgacgcggagtcgttgcggcaggtcgagcggttcgtcacggtcaagggtgagctg
tccacgaacgcgctgaagctgctcgacaacctggaggcggccaagtcgcgtccgttgtgg
agggtgctggtcgcgctgtcgatccggcacgtcggcccgaccgccgcccgcgcgctggcg
cagcagttcgggtcgatggacgcgatcctcgccgccgacgaggaggtgctggccggcgcc
gagggcgtgggtccgaccatcgccgccgcggtcgtggagtggcgggagaccgggtggcgc
caggaggtcgtgcgccgctgggccgccgcgggtgtgcggatggaggacgagcgggacgcc
tcgatcgtccgcaccctggagggcctgtccatcgtggtcaccgggtcgctcacggacttc
tcgcgcgactcggccaaggaggcgatcctcgcccgcggcggcaaggcggccggctcggtg
tcgaagaagacctctttcgtcgtggtcggcgactcgccaggatcgaagtacgacaaggcc
gtctccctgaaggtgccggtgctcgacgaggcgggcttccgcgtgctgctcgactccggc
cccgacgcggcgcgggaggtggccctcaaccccgaggaagaggcttcatga

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