Leclercia sp. W17: DVA44_20180
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Entry
DVA44_20180 CDS
T05987
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lee
Leclercia sp. W17
Pathway
lee00300
Lysine biosynthesis
lee00550
Peptidoglycan biosynthesis
lee01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DVA44_20180
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DVA44_20180
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lee01011
]
DVA44_20180
Enzymes [BR:
lee01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DVA44_20180
Peptidoglycan biosynthesis and degradation proteins [BR:
lee01011
]
Precursor biosynthesis
Amino acid ligase
DVA44_20180
BRITE hierarchy
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
THDPS_N_2
Motif
Other DBs
NCBI-ProteinID:
AXF66247
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Position
complement(4057563..4059050)
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AA seq
495 aa
AA seq
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MADRNLRDLLAPWVTGLPARELREMVLDSRVAASGDLFVAVVGHQADGRRYIPQAIAQGV
AAIIAEAKDEATDGEVREMHGVPVIYLSQLNERLSALAGRFYNEPSDRLRLVGVTGTNGK
TTTTQLMAQWAQLLGETSAVMGTVGNGLLGKVNPTENTTGSAVDVQHVLAGLAGQGATFA
AMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMENYEAAKWQLYATHHCGQAIIN
ADDEVGRRWLAKLPDAVAVSMADHINPNCHGRWLKATEVTYHDSGATIRFASSWGEGEIE
SRLMGAFNVSNLLLALATLLALGYPLAELLRTSARLQPVCGRMEVFTAPGKPTVVVDYAH
TPDALEKALEAARLHCAGKLWCVFGCGGDRDKGKRPLMGAIAEQFADIAVVTDDNPRTEE
PRAIINDILAGMLDAGRARVVEGRAEAVTNAIMQANENDVVLLAGKGHEDYQIVGTNRLD
YSDRVTAARLLGVVA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtaatttgcgcgaccttcttgctccgtgggtaacaggcttacctgcgaga
gaactgcgagagatggtactcgacagccgtgtggctgcctcgggcgatctttttgtggca
gtcgtaggtcatcaggcggacgggcgtcggtatatcccgcaggcgatagcgcaaggtgtt
gctgccattattgctgaggcaaaagatgaggccactgacggtgaagtccgtgaaatgcat
ggcgtgccggtcatctatctcagccagctgaatgaacgtctctctgcgctggcgggacgt
ttttataacgaaccctcagaccggttgcgtctggttggcgtaactggcaccaacggtaaa
accaccaccacgcagctgatggcgcagtgggcgcaactgctgggtgaaaccagcgcggtg
atgggtaccgtgggtaatggtctgttgggcaaagtgaacccaacggaaaataccaccggc
tctgccgttgacgtacagcacgtgctcgccggtctggctgggcagggcgcgaccttcgcg
gcgatggaagtctcttctcacgggctggtacagcatcgtgtcgcggcgctgaaatttgcc
gcctctgtgttcactaacctgagccgggatcacctcgattaccatggcgacatggaaaac
tacgaagcggcgaaatggcagctgtatgccacgcatcactgcggtcaggcgatcatcaac
gccgatgacgaagtaggtcgccgctggctggctaaactgccggatgccgttgcggtctcc
atggccgatcatattaatccgaactgccatggccgctggctgaaggccaccgaggtgacc
tatcacgatagcggcgcgaccattcgctttgcctcgagctggggtgaaggggaaatcgag
agccgcctgatgggggcattcaacgtcagcaacctgctgctggctctcgcgaccctgttg
gcgctcggctatccgctggcggaactgctccgtacctccgcgcgcctgcagccggtttgc
ggccgcatggaagtcttcaccgccccaggcaaaccgacggtggtggtggattatgcccat
acgccggatgcgctggagaaagcgctggaagccgcgcgcctgcactgcgccggtaaactt
tggtgcgtctttggctgcggcggcgatcgcgataaaggcaaacgtccgctgatgggtgcc
attgctgaacagttcgcggatatcgcggtcgtgaccgatgacaacccgcgcaccgaagag
ccgcgcgccatcatcaacgacattctggccggtatgctggatgcgggccgtgcccgcgtg
gtggaaggccgcgcagaagcggtgactaacgccatcatgcaggctaacgagaacgatgtg
gtcctgctggccggtaaaggccacgaagattatcagattgtcggcaccaaccgtctggat
tactccgaccgtgtaaccgcggcgcgtctgctgggagtagtggcatga
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