Leclercia sp. LSNIH1: C2U54_12190
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Entry
C2U54_12190 CDS
T05297
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
lei
Leclercia sp. LSNIH1
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lei03009
]
C2U54_12190 (rumB)
Enzymes [BR:
lei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
C2U54_12190 (rumB)
Ribosome biogenesis [BR:
lei03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C2U54_12190 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_4
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AUU84722
UniProt:
A0AAD0GFJ5
LinkDB
All DBs
Position
2472099..2473226
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWIAQPVSSQLSAKMTDLQTLLSGLPVAEWCAPVSGPEQAFRNKAK
MVVSGSVEKPLLGMLHRDGTPVDLTDCPLYPASFAPVFAALKPFIARAGLTPYNVERKRG
ELKYILLTESQLDGGMMLRFVLRSEAKLPQLRAALPWLKEQLPQLKVITANIQPVHMAIM
EGEEEIFLTDAQALAERFNDVPLWIRPKSFFQTNPTVASELYATARDWVRGLPVNHMWDL
FCGVGGFGLHCATPQMQLTGIEISAEAIACATQSAAELGLTNLHFQALDSTQFATGQGNV
PELVLVNPPRRGIGRALCDYLSQMAPEFIIYSSCNAQTMAKDIRDLPGYRIARVQLFDMF
PHTAHYEVLTLLVKS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactctatgatgccggtcgctgtcgctcctgtcagtggatagcgcagccg
gtctcttcacaactttccgccaaaatgaccgatttgcagacgctgctctctggcctgccg
gtggcggagtggtgcgcgccggtcagcgggccggaacaggcgtttcgcaataaagccaaa
atggtagtcagcggcagcgtcgaaaaaccgctgctcggcatgctgcaccgcgacggcacc
cctgtcgatctgaccgactgcccgctctatccggcctcgttcgcgccggtctttgccgcc
ctgaaaccctttattgcccgcgcgggcctgacgccctacaacgtggaacgcaagcgcggc
gagttaaagtacattctgctcaccgaaagccagcttgatggcgggatgatgctgcgcttt
gtgctgcgctctgaggccaagctgccccagctgcgcgcggcgctgccgtggctaaaggaa
cagctgccgcagctgaaggtgattaccgccaatattcagccggtgcatatggcgatcatg
gaaggggaagaggagatcttcctcaccgacgctcaggcgctggcagagcgttttaacgac
gtgccgctgtggatccgcccgaagagcttcttccagaccaacccgaccgtggcaagcgag
ctgtacgccaccgcacgcgactgggtgcgtggtctgccggttaaccatatgtgggatctc
ttctgcggcgtcggcggctttggcctgcactgcgccaccccgcagatgcagctgaccggg
attgagatctccgccgaggcgatcgcctgtgccactcagtccgccgcggaactggggctg
acgaatctgcacttccaggcgctcgattcgacgcagtttgccaccggccagggcaacgtg
ccggagctggtgctggtaaacccgccgcgccgcggtatcggtagggcgctgtgtgactac
ctgagccagatggcgccagagtttattatctactccagctgcaacgcccagacgatggcg
aaagacattcgcgacctgcccggttaccggattgcgcgggtgcagctgttcgatatgttc
ccgcatactgcacactatgaagtgctgacgctattagttaaatcctga
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