KEGG   Leisingera sp. NJS204: ETW24_09835
Entry
ETW24_09835       CDS       T05817                                 
Name
(GenBank) efflux RND transporter permease subunit
  KO
K18138  multidrug efflux pump
Organism
lej  Leisingera sp. NJS204
Pathway
lej01501  beta-Lactam resistance
lej01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:lej00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    ETW24_09835
   01503 Cationic antimicrobial peptide (CAMP) resistance
    ETW24_09835
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lej02000]
    ETW24_09835
   01504 Antimicrobial resistance genes [BR:lej01504]
    ETW24_09835
Transporters [BR:lej02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   ETW24_09835
Antimicrobial resistance genes [BR:lej01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    ETW24_09835
SSDB
Motif
Pfam: ACR_tran MMPL SecD_SecF_C
Other DBs
NCBI-ProteinID: QAX29642
LinkDB
Position
2001840..2004965
AA seq 1041 aa
MFSSIFIERPKFAIVISLVLTVMGVIGYFALPVAQFPEITPPVVNVTASYPGANAETVEK
SVAAPIEAQVNGVDGMLYMSSTSADDGSYSLSVTFEVGTDADIASVNVQNRVAQATAALP
SEVTANGVVTQKSSSNMLLVAALTSPDSSYDNVFLSNYAAINIKDALARVEGVGKAEILT
NFEYAMRVWLDPNKMAGLGISPGDVINAVREQNIEVSAGQVGAPPVPGDQVFQYTIKSKG
RLTEVAEFEDIVIRTGDNGGTVRLRDISKVELGASNYSSSGYFDGVPATILAVYQSPGAN
ALAVSEAVLAEMDRLSEDFPDDVAYSVPFNTTDFVEQSLNDVISTLMMTFALVITVVFIF
LGSFRATIIPAVAIPVSLIGTFAFLLVLGMSLNTISLFALVLAIGIVVDDAIVVVENVER
IIAEEGLPPAEATRKAMGQITGPVIATTLVLLAVFVPVTFMPGITGKLYSQFAVTISVAV
VISSVNALTLSPALCSIVLKARSGPPKGLLALFENMIGGVRSGYLSIVTRLLRLPVIGLV
IIAAVAFGTGTIFNSTSKGFLPAEDNGYLFVDVQLPDAAALGRTETVTGRIDEQIRQIPG
VQGTVLVNGFSLLNGAGANGAMIIATLHPWDERQTEALHPNAILGQIYGIANGEAAASIV
AFNPPPISGLGMSAGVEMAIQQTAGGTPQDLAQSVGSLVYSANQRPEIAQSYTTFRANVP
QVFVDLDREKAKTLNVPISEVFQTMQAHLGSYYVNDFNLFGRVYKVMLQAEGTYRDKIED
IGGLYVRTQSGEMVPLSTLIDVENVLGPVLLKRHNIFRSATVTAVPAAGLSTGDAIRVMQ
EEAATALPPGYAFEWTGTAQQQLDSAGLVTVILAMAVLFGYLFLVAQYESWTMPVAILLS
VIVALFGAVAAVAIAGNDINLYTQIGMIMLIGLASKNAILIVEFAMEQRAAGLSIRDAAQ
EAAKQRFRAVMMTALSFLLGVVPLLVASGAGAASQRAIGIAVFGGMLAATVVGVIVVPVL
YAMMQGMRERIKGTPAAQPAE
NT seq 3126 nt   +upstreamnt  +downstreamnt
atgttttcctctatcttcatcgagcggccgaaattcgcaatcgtcatctcgctggtgctg
acggtcatgggggtgatcggctacttcgcgctgcccgtggcgcagttcccggaaatcacc
ccgccggtggtgaatgtcaccgccagctatcccggcgccaatgctgaaaccgtggaaaaa
agcgtcgccgcgccgatcgaggcgcaggtcaacggggtggacgggatgctctatatgtcc
tccacttcggctgacgacggcagctattctctttcagtgacctttgaagttggcactgat
gccgatatcgcgtccgtcaacgtgcagaaccgggtggcgcaggcaaccgcggcgctgccg
tccgaggtcacggcaaacggtgtggtgacgcagaaaagttcctccaacatgctgctggtt
gcggccctgacatcacctgacagctcgtatgacaatgtgtttctgtcaaactatgccgcc
atcaacatcaaggatgccctggcccgcgtcgaaggcgtaggtaaggcggaaatcctgacc
aactttgagtacgccatgcgggtctggctggatccgaacaagatggccggcctcgggatt
tcacccggtgacgtgatcaacgcggtgcgcgaacagaacatcgaagtctccgccgggcag
gtgggggcgccgccggttccgggtgatcaggtgttccagtataccatcaagtccaagggc
cgcctgaccgaggttgctgagtttgaggacatcgtcatccgcaccggcgacaacggcggc
actgtccggctcagggacatttccaaggttgaacttggggcctccaactacagttcctcg
ggctatttcgacggcgtgccggcgacgatcctggctgtctaccagtctcccggcgccaat
gcgctggcagtgtccgaggctgtgctggcagagatggaccggttgtcggaggatttcccg
gacgacgttgcctattcggtgccgttcaacaccacagattttgtcgaacagtcgctgaat
gacgtgatttccaccctgatgatgacctttgcactggtgatcacggtggtgttcatcttc
ctcggctctttccgggcaacaattatccccgcggtggccattccggtgtcccttatcggg
acatttgccttcctgctggtgcttggcatgtcgctcaacaccatttcgctgttcgcactg
gtgctggcgatcggcattgtggtggatgacgccatcgtggtggtggagaacgtcgaacgg
atcattgccgaggaggggctgcccccggccgaggccacgcgcaaagcaatggggcagatc
accggtccggtgattgccacaaccttggtgctgctggcggtgtttgtgccggttaccttc
atgcccgggatcaccggtaagctgtactcgcagtttgcggtgaccatttcggttgcggtt
gtgatctcctcggtcaacgcgctgaccctgtcgccggcgctttgttctattgtgctcaag
gcgcgctccggacctccaaaaggcttgctggcactgttcgagaacatgatcggcggcgtc
cgcagcggatatctgagcatcgtcacccgcctgctgcgcctgccggtgatcgggcttgtc
atcatcgcggcggttgcctttggtaccggcacaattttcaactctacgtccaaaggcttc
ctgccggccgaagacaacggctatctgtttgtggacgtccagctgcctgacgcggcggcg
ctgggacggacggagacagtgaccggccggattgacgagcagatccggcagatccccggt
gtccagggcacggttctggtcaatggtttcagcctgctgaacggggccggggccaatggt
gcgatgatcatcgccacccttcacccctgggatgaacggcaaaccgaggcgctgcatccc
aacgccatcctcggccagatctatggcattgctaacggagaagccgcggccagcatcgtc
gccttcaacccgccgccgatctcgggcctgggcatgtccgcaggtgtggaaatggccatc
cagcagaccgcaggcggcaccccgcaggatctggcacaatcggtcggctcgctggtctat
tctgccaaccagcgtccggagatcgcccagtcctatacaaccttccgggccaacgtgccg
caggtgtttgtcgatctggaccgcgagaaggccaagacgctgaatgtgccgatttccgag
gtgttccagaccatgcaggcgcatctggggtcctactatgtcaacgacttcaacctgttc
gggcgtgtctacaaggtgatgctgcaagcggaaggcacctaccgcgacaagattgaggat
atcggcggcctgtatgtgcggacgcagtcaggtgaaatggtgccgctgtcgaccctgatt
gatgtggaaaacgtgttggggccggtgctgctgaaacggcacaatatcttccgctcggcc
actgtcactgctgtgccggcggcaggtctgtccaccggcgatgcaatccgggtgatgcag
gaggaagccgcgacggcgctgccgccgggttatgcctttgaatggacgggcacggcgcag
cagcagctggactcggcaggtctggtcaccgtgatcctggcgatggctgtattgttcggt
tatctgttcctggtcgcgcaatacgaaagctggacgatgccggtggcaattctgctgtcg
gtgatcgtggccctgttcggagcggttgcggcagtggcaatcgccggcaatgacatcaac
ctctacacgcagatcgggatgatcatgctgatcggcctggcgtcgaaaaacgccattctg
attgtcgagttcgcgatggagcagcgcgccgccgggctctccatccgcgatgccgcgcag
gaggcggccaaacagcgtttccgcgcggtgatgatgacagcgctgtccttcctgctgggg
gtggtgccattgctggttgcgtcaggtgccggcgcggccagccagcgggccatcggtatt
gccgtctttggcggcatgctggcggcaaccgtggttggcgtcatcgtggtgccggtgctt
tatgcgatgatgcaggggatgcgggaacgcatcaaaggcacaccggcagcccagccggca
gagtag

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