Leisingera sp. NJS204: ETW24_09835
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Entry
ETW24_09835 CDS
T05817
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lej
Leisingera sp. NJS204
Pathway
lej01501
beta-Lactam resistance
lej01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lej00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ETW24_09835
01503 Cationic antimicrobial peptide (CAMP) resistance
ETW24_09835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lej02000
]
ETW24_09835
01504 Antimicrobial resistance genes [BR:
lej01504
]
ETW24_09835
Transporters [BR:
lej02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ETW24_09835
Antimicrobial resistance genes [BR:
lej01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ETW24_09835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QAX29642
LinkDB
All DBs
Position
2001840..2004965
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AA seq
1041 aa
AA seq
DB search
MFSSIFIERPKFAIVISLVLTVMGVIGYFALPVAQFPEITPPVVNVTASYPGANAETVEK
SVAAPIEAQVNGVDGMLYMSSTSADDGSYSLSVTFEVGTDADIASVNVQNRVAQATAALP
SEVTANGVVTQKSSSNMLLVAALTSPDSSYDNVFLSNYAAINIKDALARVEGVGKAEILT
NFEYAMRVWLDPNKMAGLGISPGDVINAVREQNIEVSAGQVGAPPVPGDQVFQYTIKSKG
RLTEVAEFEDIVIRTGDNGGTVRLRDISKVELGASNYSSSGYFDGVPATILAVYQSPGAN
ALAVSEAVLAEMDRLSEDFPDDVAYSVPFNTTDFVEQSLNDVISTLMMTFALVITVVFIF
LGSFRATIIPAVAIPVSLIGTFAFLLVLGMSLNTISLFALVLAIGIVVDDAIVVVENVER
IIAEEGLPPAEATRKAMGQITGPVIATTLVLLAVFVPVTFMPGITGKLYSQFAVTISVAV
VISSVNALTLSPALCSIVLKARSGPPKGLLALFENMIGGVRSGYLSIVTRLLRLPVIGLV
IIAAVAFGTGTIFNSTSKGFLPAEDNGYLFVDVQLPDAAALGRTETVTGRIDEQIRQIPG
VQGTVLVNGFSLLNGAGANGAMIIATLHPWDERQTEALHPNAILGQIYGIANGEAAASIV
AFNPPPISGLGMSAGVEMAIQQTAGGTPQDLAQSVGSLVYSANQRPEIAQSYTTFRANVP
QVFVDLDREKAKTLNVPISEVFQTMQAHLGSYYVNDFNLFGRVYKVMLQAEGTYRDKIED
IGGLYVRTQSGEMVPLSTLIDVENVLGPVLLKRHNIFRSATVTAVPAAGLSTGDAIRVMQ
EEAATALPPGYAFEWTGTAQQQLDSAGLVTVILAMAVLFGYLFLVAQYESWTMPVAILLS
VIVALFGAVAAVAIAGNDINLYTQIGMIMLIGLASKNAILIVEFAMEQRAAGLSIRDAAQ
EAAKQRFRAVMMTALSFLLGVVPLLVASGAGAASQRAIGIAVFGGMLAATVVGVIVVPVL
YAMMQGMRERIKGTPAAQPAE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctctatcttcatcgagcggccgaaattcgcaatcgtcatctcgctggtgctg
acggtcatgggggtgatcggctacttcgcgctgcccgtggcgcagttcccggaaatcacc
ccgccggtggtgaatgtcaccgccagctatcccggcgccaatgctgaaaccgtggaaaaa
agcgtcgccgcgccgatcgaggcgcaggtcaacggggtggacgggatgctctatatgtcc
tccacttcggctgacgacggcagctattctctttcagtgacctttgaagttggcactgat
gccgatatcgcgtccgtcaacgtgcagaaccgggtggcgcaggcaaccgcggcgctgccg
tccgaggtcacggcaaacggtgtggtgacgcagaaaagttcctccaacatgctgctggtt
gcggccctgacatcacctgacagctcgtatgacaatgtgtttctgtcaaactatgccgcc
atcaacatcaaggatgccctggcccgcgtcgaaggcgtaggtaaggcggaaatcctgacc
aactttgagtacgccatgcgggtctggctggatccgaacaagatggccggcctcgggatt
tcacccggtgacgtgatcaacgcggtgcgcgaacagaacatcgaagtctccgccgggcag
gtgggggcgccgccggttccgggtgatcaggtgttccagtataccatcaagtccaagggc
cgcctgaccgaggttgctgagtttgaggacatcgtcatccgcaccggcgacaacggcggc
actgtccggctcagggacatttccaaggttgaacttggggcctccaactacagttcctcg
ggctatttcgacggcgtgccggcgacgatcctggctgtctaccagtctcccggcgccaat
gcgctggcagtgtccgaggctgtgctggcagagatggaccggttgtcggaggatttcccg
gacgacgttgcctattcggtgccgttcaacaccacagattttgtcgaacagtcgctgaat
gacgtgatttccaccctgatgatgacctttgcactggtgatcacggtggtgttcatcttc
ctcggctctttccgggcaacaattatccccgcggtggccattccggtgtcccttatcggg
acatttgccttcctgctggtgcttggcatgtcgctcaacaccatttcgctgttcgcactg
gtgctggcgatcggcattgtggtggatgacgccatcgtggtggtggagaacgtcgaacgg
atcattgccgaggaggggctgcccccggccgaggccacgcgcaaagcaatggggcagatc
accggtccggtgattgccacaaccttggtgctgctggcggtgtttgtgccggttaccttc
atgcccgggatcaccggtaagctgtactcgcagtttgcggtgaccatttcggttgcggtt
gtgatctcctcggtcaacgcgctgaccctgtcgccggcgctttgttctattgtgctcaag
gcgcgctccggacctccaaaaggcttgctggcactgttcgagaacatgatcggcggcgtc
cgcagcggatatctgagcatcgtcacccgcctgctgcgcctgccggtgatcgggcttgtc
atcatcgcggcggttgcctttggtaccggcacaattttcaactctacgtccaaaggcttc
ctgccggccgaagacaacggctatctgtttgtggacgtccagctgcctgacgcggcggcg
ctgggacggacggagacagtgaccggccggattgacgagcagatccggcagatccccggt
gtccagggcacggttctggtcaatggtttcagcctgctgaacggggccggggccaatggt
gcgatgatcatcgccacccttcacccctgggatgaacggcaaaccgaggcgctgcatccc
aacgccatcctcggccagatctatggcattgctaacggagaagccgcggccagcatcgtc
gccttcaacccgccgccgatctcgggcctgggcatgtccgcaggtgtggaaatggccatc
cagcagaccgcaggcggcaccccgcaggatctggcacaatcggtcggctcgctggtctat
tctgccaaccagcgtccggagatcgcccagtcctatacaaccttccgggccaacgtgccg
caggtgtttgtcgatctggaccgcgagaaggccaagacgctgaatgtgccgatttccgag
gtgttccagaccatgcaggcgcatctggggtcctactatgtcaacgacttcaacctgttc
gggcgtgtctacaaggtgatgctgcaagcggaaggcacctaccgcgacaagattgaggat
atcggcggcctgtatgtgcggacgcagtcaggtgaaatggtgccgctgtcgaccctgatt
gatgtggaaaacgtgttggggccggtgctgctgaaacggcacaatatcttccgctcggcc
actgtcactgctgtgccggcggcaggtctgtccaccggcgatgcaatccgggtgatgcag
gaggaagccgcgacggcgctgccgccgggttatgcctttgaatggacgggcacggcgcag
cagcagctggactcggcaggtctggtcaccgtgatcctggcgatggctgtattgttcggt
tatctgttcctggtcgcgcaatacgaaagctggacgatgccggtggcaattctgctgtcg
gtgatcgtggccctgttcggagcggttgcggcagtggcaatcgccggcaatgacatcaac
ctctacacgcagatcgggatgatcatgctgatcggcctggcgtcgaaaaacgccattctg
attgtcgagttcgcgatggagcagcgcgccgccgggctctccatccgcgatgccgcgcag
gaggcggccaaacagcgtttccgcgcggtgatgatgacagcgctgtccttcctgctgggg
gtggtgccattgctggttgcgtcaggtgccggcgcggccagccagcgggccatcggtatt
gccgtctttggcggcatgctggcggcaaccgtggttggcgtcatcgtggtgccggtgctt
tatgcgatgatgcaggggatgcgggaacgcatcaaaggcacaccggcagcccagccggca
gagtag
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