Lodderomyces elongisporus: PVL30_000511
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Entry
PVL30_000511 CDS
T01116
Symbol
JHD1
Name
(RefSeq) JmjC domain-containing histone demethylation protein 1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
PVL30_000511 (JHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lel03000
]
PVL30_000511 (JHD1)
04121 Ubiquitin system [BR:
lel04121
]
PVL30_000511 (JHD1)
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_000511 (JHD1)
Enzymes [BR:
lel01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
PVL30_000511 (JHD1)
Transcription factors [BR:
lel03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
PVL30_000511 (JHD1)
Ubiquitin system [BR:
lel04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PVL30_000511 (JHD1)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
PVL30_000511 (JHD1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
PVL30_000511 (JHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
Cupin_8
JmjC
PHD
PHD_5
PHD_ash2p_like
JmjC_2
Cupin_2
Cupin_1
zf-RING_2
zf-HC5HC2H
zf-rbx1
RH_dom
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
5234776
NCBI-ProteinID:
XP_001528004
UniProt:
A5DT38
LinkDB
All DBs
Position
1:1427160..1428551
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AA seq
463 aa
AA seq
DB search
MMKATDTCPICTDRDSEKVLWIQCSECKQWFHTQCLKLKEYEVSSIVAYHCRDCSRLKGP
SILKRQSKRTRVSVDYVALNEGQTIALDKKSHHHLHSFLELKSVPNIEISSTLTKGFALK
MGMERPILIPKAQLDIVGMKLPLDRNKITIDYITECCGANTPVEVMDVISQQGVSPSWKL
AQWQEYFNTAQEYRDRIRNVISLEISSVQNLGTSFTRPQMVRDLDLVDKVWDPKDEQERS
KVTKYCLMSVKDCFTDFHIDFGGTSVYYYVLKGCKTFLFYPPTDDNLALYTLWCMEPKQN
IIWFPEYSKVVNKRKVHPLGGFKVTLQPGDLFIIPSGWIHCVHTPQDSIVFGGNFLTLRD
MKMQLKIYDIERVTKVPNKFRFPMFNKVIWLSAWYYSQHKEEMLKDVADDKVLAIEIVDL
WIKHLNDHYNLSLSNQVAKRSIPGSIKKPLLFIEDLRKWKESI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagctacagacacatgtcccatttgtaccgatagagattcggagaaggttctt
tggatccaatgttcagaatgcaaacagtggtttcacacgcaatgcttgaagctaaaagag
tatgaagtgctgtctatcgtagcctaccattgtcgtgattgcagtcgactaaaagggcca
tcgattttgaaacgacagtccaagagaacaagagtttcggtcgactatgtggcactcaat
gaaggtcagactattgcgcttgataaaaagagccatcaccacttgcatagttttttggaa
ttgaaaagcgtgcccaatatagagataagttccacactaacaaagggatttgcattgaaa
atgggaatggaaagaccgattcttatcccaaaagctcaattggatattgttggaatgaaa
cttcctttggatcgaaataaaattacaattgattatattactgaatgctgtggtgcaaat
acccctgttgaggtaatggatgtgatttcacaacaaggagtttctccctcttggaagttg
gcccaatggcaggaatatttcaatacagcgcaagaatatcgagaccgaatacggaacgtg
atatcgttggagatttcaagtgttcaaaacttgggcacgtcgtttactcggccccaaatg
gtgcgcgacttggatttagtggacaaagtatgggaccccaaggatgagcaagaacggagc
aaagtgaccaaatattgtttaatgtcggtaaaggattgttttactgattttcacattgac
tttggcggtacatcagtttattactatgttttgaaagggtgcaagacatttcttttttat
cctccaacagatgataatcttgctctttacactttgtggtgtatggaaccaaaacagaac
attatttggttcccagagtatagcaaagttgtcaataaacgaaaagttcatccgctaggc
ggtttcaaagtcactttgcaacccggtgacttgttcattatcccaagcggttggattcat
tgtgttcataccccgcaagactcgatagtctttggaggcaatttcctcacactaagggat
atgaaaatgcagctcaagatatatgatattgagcgtgttactaaagtgcccaataagttt
agattccccatgttcaacaaagtcatatggttgagtgcatggtactattcccagcacaag
gaagagatgctcaaagatgttgcagatgataaggtgcttgcgattgaaatagtggatcta
tggatcaaacatcttaacgaccactacaatttgagtttgtcaaaccaagtggcgaaacga
agcattcctggtagtatcaaaaagccattgctctttatagaggacttgcggaaatggaag
gaaagtatataa
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