Lodderomyces elongisporus: PVL30_000641
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Entry
PVL30_000641 CDS
T01116
Symbol
NTH1_2
Name
(RefSeq) alpha,alpha-trehalase nth1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVL30_000641 (NTH1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_000641 (NTH1_2)
Enzymes [BR:
lel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PVL30_000641 (NTH1_2)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVL30_000641 (NTH1_2)
Prokaryotic type
PVL30_000641 (NTH1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
5235338
NCBI-ProteinID:
XP_001528146
UniProt:
A5DTI0
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Position
1:complement(1795029..1796255)
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AA seq
408 aa
AA seq
DB search
MPGRAALRKRPVNTSIISPVTSRSTRRKVTVENEKSNTSEVVHTTKLDAFVFKEDNSTFI
DVDQNQEQEQEPKQEPKQEPKPGPTLVKIEHIAVEIEKEGLDSGLNRDSEHMTTSALSPA
HEPNVFVKADLEDANSHSPTNWVKIYNEVVELRSKFFAPVDHQGCESMPNTITPNLKTKD
PKKYRFQLLISLMLSSQTKDEVNYDAMVKLERGLSRHFPKLGFCLESMSKLSPNEIDAYI
AKVGFHNRKAQYIQKACQILINDFNGDIPKTIQEIVKLPGVGPKMGYLLLQCGWGINSGI
GVDVHLHRLAEMWHWVTPKASTPEKCRLELESWLPKKYWIDVNPLMVGFGQVICVPRAPN
CDICSLGRKGLCKAADKRLLKTPISDARKVKLMKQRADLTNLIEEFSA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcagagctgcattaagaaagagaccggttaacacatcaattatatctcctgtc
acatccagatcaactagaaggaaagttacagttgaaaatgagaagctgaatacatcagaa
gtagtccacacaaccaaattggacgcgtttgtctttaaagaagataattcgacatttatt
gatgtcgaccagaatcaagagcaagaacaagagccaaaacaagagccaaagcaagagccc
aaaccaggccctacacttgtcaagatagagcacatagcagttgagatagaaaaggaaggg
ctagattcaggtctaaaccgagacctggaacatatgacgacgctggcgttgtcgccggca
cacgagccaaatgtttttgtaaaagcagaccttgaagatgcgaatagtcatagtcccaca
aattgggtcaaaatttataacgaagtagttgaattacgctcaaaattttttgcaccggta
gaccaccaaggttgtgagtccatgcccaacacaatcaccccaaacttgaagacaaaggac
cccaaaaaatacagatttcaactcctaatatccttgatgctttcttctcaaaccaaagat
gaagtcaactacgatgcaatggttaagttggagagaggtttactgagacattttcccaaa
ttgggattctgtcttgagtcaatgtcaaaacttagtcctaatgaaattgatgcatatatt
gccaaggtaggttttcataatcgcaaagcacagtacattcaaaaagcatgtcaaatcctt
atcaatgattttaacggcgatataccaaaaacaatacaagaaattgtcaaacttcctggt
gtaggtcccaagatggggtatttgctactacaatgtggttggggcattaatctgggaatt
ggtgttgatgtacatttgcatcgactagctgaaatgtggcattgggtaactcccaaggca
agtacacccgagaaatgccgattagagctagagagctggctaccaaagaaatattggatt
gacgtcaaccctttgatggtgggattcggtcaagttatatgtgttcccagagctcctaac
tgtgatatatgtagtttgggtcggaaaggtttatgcaaggctgccgataaaagattgttg
aagactccgatatcagatgcaagaaaggtcaagttgatgaagcaaagagcggatttgaca
aatttgattgaagagttctctgcgtaa
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