KEGG   Lodderomyces elongisporus: PVL30_001925
Entry
PVL30_001925      CDS       T01116                                 
Name
(RefSeq) uncharacterized protein
  KO
K12852  116 kDa U5 small nuclear ribonucleoprotein component
Organism
lel  Lodderomyces elongisporus
Pathway
lel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PVL30_001925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lel03041]
    PVL30_001925
Spliceosome [BR:lel03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PVL30_001925
 Complex C
   U5 SnRNP specific factors
    PVL30_001925
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_IV EFTUD2 MMR_HSR1 Septin Dynamin_N FtsK_SpoIIIE DUF7571
Other DBs
NCBI-GeneID: 5234068
NCBI-ProteinID: XP_001527125
UniProt: A5DX67
LinkDB
Position
2:1642074..1645151
AA seq 1025 aa
MDDEEIYDEFGNLIGDELDSDVENSRSSQEILGDEKEYPDAKTNGHQATQIVVAGEEEHE
EQEEQEEQEEKEENHDDDYDVVAGQEASFQSRALVKRRLSINDGEIIYVNPADATLDEQV
IDPNIQKEMKTTIDEKELPQLTYSREFLIDTINNVPERIRNVAVVGSHQSGKTRFIDTFI
KNTHILPQDLESTKREAKPLRYLDNYKLEIERETTIKTSAITLMLQDQRDRSFAITLVDT
PGHIDFQDEVVAGLQLCDGAILVIDAVIGFTFRDKKLIDEIMKRDLPIIIVLNKIDNLIL
KLRLPPKDSYLKMYNILDDINAYVTESSKRFNYSQAIEFSPTLGNVIFASADYDISFSLQ
SFVALYAQTQPHILEDANFANFLWGEYFLDPETNRIVTDSQQGQLPRTFVSFILDMLYDI
TSNVIISEPSNNRLPKLLWDHFRVSLPKKEYKKQLKDLLRVVFKAIFRNDTGFVDSVTSF
ISSPRNVTNSSLHVTDNHNNHNNISKNGSGSSSSNNINSNGKPSSITGIIPKVVESPDGG
TFLCLVRLIEEGLVEGYQIQVISGDTDLNELSRKVLTVQRLYIPGGRYNVPVSSIGPGSV
VLVEGIDSSFKKGALIMKESSYTANQSMQYMFPNYNVNSVLKLGMEAVDERQTATLLASL
RKADKAYLSLVVRVEETGEITVIAPGEFYMDCVLHDVRELFADEFQIRVSDPTTIFSETC
TEMSFTSIPAKTSNDSFSISIIAEPVNDPDLSNAIESGVLHANLSRKEMATILKTQFGWD
ALAARSVWVFGPKDLIEPDILIDDSFQGETDKQQLMKLKESICSGFEWAIAEGPLMAETI
RNTKFKILEAKFKSDDLASYTPAQIIPVIQRACYTGFLTAQPRLMEPVYRLDAICFYKNI
RVVDELLKSRRGHIETRDPIEGTALHYIVGYIPVVDSFGFASDVKLYTYRNANTWLSFSH
WSIVPGDPFDLVCELPRLKPAPVESLSRDFLLKTRHRKGLTGEPTLQKYIDSEIYDKLKE
RGLVA
NT seq 3078 nt   +upstreamnt  +downstreamnt
atggatgacgaagaaatttatgatgagtttggaaaccttataggagatgaattggattca
gatgtagaaaattcaagaagttcgcaggagatactcggtgatgaaaaagagtacccagac
gcaaagactaatggtcatcaagctacccaaatagtggtagcgggagaagaagaacatgaa
gaacaagaagaacaagaagaacaagaagaaaaagaagaaaatcatgatgacgattatgat
gtagtagcaggacaagaggctagctttcagagtcgagcattggtgaagagacgcctatct
attaacgatggtgaaattatatatgtaaatcctgctgatgcgactcttgatgaacaagtg
attgatccgaacattcaaaaggagatgaaaactactattgatgagaaagaactaccacaa
ttgacgtattctagagaatttcttatagataccataaataatgtccccgaaagaattcgg
aatgttgctgttgttggtagtcatcaaagtggaaagaccagatttatcgacacttttatt
aagaatacacatattttaccccaagatcttgagagtaccaaaagagaggcaaaaccgctc
cgatatttggacaactacaaattggaaattgagcgagaaacaacaatcaaaacctcggca
atcactttgatgcttcaagatcagcgagatagatcatttgcaattactttggtagacact
ccgggacacattgattttcaagacgaagtggttgccgggttacaactttgtgatggtgca
atcctcgttatagacgctgttattggatttacatttcgagataagaaactcattgacgag
ataatgaaacgggatttgcccattataattgtattaaacaaaattgacaatttgatatta
aaattgcgactaccaccaaaagattcttacttgaagatgtataatattctcgatgacata
aatgcttacgtcacggaaagcctgaaaagattcaactactctcaagctatagagttcctg
cccactttgggaaatgttatatttgcttcagcagactacgatatttctttcagtttacaa
agttttgttgctttgtatgcacagacacagccgcatatattagaagatgccaattttgca
aatttcttatggggagaatactttctagatcccgaaactaacagaattgttacagattct
caacaaggacaacttccgcgaacatttgtctcgttcattctagacatgttgtacgatatc
acatcaaatgtgatcatatcagaaccttcaaataacagattaccaaaacttttgtgggat
cattttagagtatctctacctaagaaggagtataaaaagcaactaaaagaccttcttaga
gttgtgtttaaagcaatttttaggaacgatacaggttttgtggattccgtaacgtccttt
atcctgtcgccaagaaatgtgacgaatagctcattgcacgtcactgacaatcacaacaac
cacaacaatatcagcaaaaatggcagcggtagtagtagtagtaacaatatcaactcgaat
ggtaaaccgagcagtattacaggaataataccgaaagtggttgagtcacctgatggagga
acattcctatgtttagtgcggttaattgaagaaggattagttgaaggataccaaatacaa
gtcataagcggtgacacagatctaaacgagttatctagaaaggttttaactgtacaaagg
ctttatatacctggtggcaggtataatgtaccggtatcttctattggccctggaagtgtt
gttctcgttgaaggcattgattctagctttaagaaaggagcattgataatgaaagaaagt
tcttacactgctaaccaactgatgcaatacatgtttccaaattataacgtaaactccgtt
ttgaaactaggtatggaagcagtggatgaacggcaaactgcgactcttttagcaagtttg
agaaaagcagacaaagcatatctttcacttgttgtacgagtcgaagaaacgggagaaatc
acagttattgccccaggtgagttttatatggattgtgttcttcacgatgtaagagagctt
tttgctgatgagttccagatcagagtaagtgaccccactacaattttttctgaaacatgc
acggaaatgtcatttaccagtattcccgccaaaacttcaaatgattcattttctatttcc
atcattgcagaaccagtcaacgatcccgacttgagcaatgcgattgagtctggtgtacta
catgcgaatttatcgagaaaggaaatggcaactattttaaagacacagtttgggtgggat
gcgctagctgcaaggtctgtatgggtgtttggtccaaaagatcttatcgaacccgatata
ttaattgatgactcatttcaaggagaaacggataaacaacagttgatgaagttgaaggag
tctatttgttcaggattcgagtgggctattgccgagggtcctttaatggcagagaccatc
cgaaacactaaatttaagattcttgaagctaagttcaaactggacgacttggcttcttat
actccagcacaaattatacctgtcattcagagagcttgctatactggtttccttacagca
cagcctagattgatggagcctgtttatcgattagatgcaatttgtttctacaaaaacatt
agagtagttgacgagttactcaaaagtagaagggggcatattgaaacacgcgacccaatc
gaagggactgctcttcattacattgtcggttatataccagtcgtggatagttttggattt
gcgtcagatgtgaagttgtacacatatcgtaacgcaaatacgtggttgctgttttcccat
tggagtatagttccaggagatccttttgatttggtctgcgagttacctcgtctcaaacca
gcacccgtggagtcattatcacgggactttttactaaaaacaagacataggaaaggattg
actggtgaacctactttacaaaaatacatagactcggagatttacgataaattaaaagag
cgtggattggtggcgtga

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