Lodderomyces elongisporus: PVL30_001925
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Entry
PVL30_001925 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lel
Lodderomyces elongisporus
Pathway
lel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVL30_001925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lel03041
]
PVL30_001925
Spliceosome [BR:
lel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PVL30_001925
Complex C
U5 SnRNP specific factors
PVL30_001925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
EFTUD2
MMR_HSR1
Septin
Dynamin_N
FtsK_SpoIIIE
DUF7571
Motif
Other DBs
NCBI-GeneID:
5234068
NCBI-ProteinID:
XP_001527125
UniProt:
A5DX67
LinkDB
All DBs
Position
2:1642074..1645151
Genome browser
AA seq
1025 aa
AA seq
DB search
MDDEEIYDEFGNLIGDELDSDVENSRSSQEILGDEKEYPDAKTNGHQATQIVVAGEEEHE
EQEEQEEQEEKEENHDDDYDVVAGQEASFQSRALVKRRLSINDGEIIYVNPADATLDEQV
IDPNIQKEMKTTIDEKELPQLTYSREFLIDTINNVPERIRNVAVVGSHQSGKTRFIDTFI
KNTHILPQDLESTKREAKPLRYLDNYKLEIERETTIKTSAITLMLQDQRDRSFAITLVDT
PGHIDFQDEVVAGLQLCDGAILVIDAVIGFTFRDKKLIDEIMKRDLPIIIVLNKIDNLIL
KLRLPPKDSYLKMYNILDDINAYVTESSKRFNYSQAIEFSPTLGNVIFASADYDISFSLQ
SFVALYAQTQPHILEDANFANFLWGEYFLDPETNRIVTDSQQGQLPRTFVSFILDMLYDI
TSNVIISEPSNNRLPKLLWDHFRVSLPKKEYKKQLKDLLRVVFKAIFRNDTGFVDSVTSF
ISSPRNVTNSSLHVTDNHNNHNNISKNGSGSSSSNNINSNGKPSSITGIIPKVVESPDGG
TFLCLVRLIEEGLVEGYQIQVISGDTDLNELSRKVLTVQRLYIPGGRYNVPVSSIGPGSV
VLVEGIDSSFKKGALIMKESSYTANQSMQYMFPNYNVNSVLKLGMEAVDERQTATLLASL
RKADKAYLSLVVRVEETGEITVIAPGEFYMDCVLHDVRELFADEFQIRVSDPTTIFSETC
TEMSFTSIPAKTSNDSFSISIIAEPVNDPDLSNAIESGVLHANLSRKEMATILKTQFGWD
ALAARSVWVFGPKDLIEPDILIDDSFQGETDKQQLMKLKESICSGFEWAIAEGPLMAETI
RNTKFKILEAKFKSDDLASYTPAQIIPVIQRACYTGFLTAQPRLMEPVYRLDAICFYKNI
RVVDELLKSRRGHIETRDPIEGTALHYIVGYIPVVDSFGFASDVKLYTYRNANTWLSFSH
WSIVPGDPFDLVCELPRLKPAPVESLSRDFLLKTRHRKGLTGEPTLQKYIDSEIYDKLKE
RGLVA
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaagaaatttatgatgagtttggaaaccttataggagatgaattggattca
gatgtagaaaattcaagaagttcgcaggagatactcggtgatgaaaaagagtacccagac
gcaaagactaatggtcatcaagctacccaaatagtggtagcgggagaagaagaacatgaa
gaacaagaagaacaagaagaacaagaagaaaaagaagaaaatcatgatgacgattatgat
gtagtagcaggacaagaggctagctttcagagtcgagcattggtgaagagacgcctatct
attaacgatggtgaaattatatatgtaaatcctgctgatgcgactcttgatgaacaagtg
attgatccgaacattcaaaaggagatgaaaactactattgatgagaaagaactaccacaa
ttgacgtattctagagaatttcttatagataccataaataatgtccccgaaagaattcgg
aatgttgctgttgttggtagtcatcaaagtggaaagaccagatttatcgacacttttatt
aagaatacacatattttaccccaagatcttgagagtaccaaaagagaggcaaaaccgctc
cgatatttggacaactacaaattggaaattgagcgagaaacaacaatcaaaacctcggca
atcactttgatgcttcaagatcagcgagatagatcatttgcaattactttggtagacact
ccgggacacattgattttcaagacgaagtggttgccgggttacaactttgtgatggtgca
atcctcgttatagacgctgttattggatttacatttcgagataagaaactcattgacgag
ataatgaaacgggatttgcccattataattgtattaaacaaaattgacaatttgatatta
aaattgcgactaccaccaaaagattcttacttgaagatgtataatattctcgatgacata
aatgcttacgtcacggaaagcctgaaaagattcaactactctcaagctatagagttcctg
cccactttgggaaatgttatatttgcttcagcagactacgatatttctttcagtttacaa
agttttgttgctttgtatgcacagacacagccgcatatattagaagatgccaattttgca
aatttcttatggggagaatactttctagatcccgaaactaacagaattgttacagattct
caacaaggacaacttccgcgaacatttgtctcgttcattctagacatgttgtacgatatc
acatcaaatgtgatcatatcagaaccttcaaataacagattaccaaaacttttgtgggat
cattttagagtatctctacctaagaaggagtataaaaagcaactaaaagaccttcttaga
gttgtgtttaaagcaatttttaggaacgatacaggttttgtggattccgtaacgtccttt
atcctgtcgccaagaaatgtgacgaatagctcattgcacgtcactgacaatcacaacaac
cacaacaatatcagcaaaaatggcagcggtagtagtagtagtaacaatatcaactcgaat
ggtaaaccgagcagtattacaggaataataccgaaagtggttgagtcacctgatggagga
acattcctatgtttagtgcggttaattgaagaaggattagttgaaggataccaaatacaa
gtcataagcggtgacacagatctaaacgagttatctagaaaggttttaactgtacaaagg
ctttatatacctggtggcaggtataatgtaccggtatcttctattggccctggaagtgtt
gttctcgttgaaggcattgattctagctttaagaaaggagcattgataatgaaagaaagt
tcttacactgctaaccaactgatgcaatacatgtttccaaattataacgtaaactccgtt
ttgaaactaggtatggaagcagtggatgaacggcaaactgcgactcttttagcaagtttg
agaaaagcagacaaagcatatctttcacttgttgtacgagtcgaagaaacgggagaaatc
acagttattgccccaggtgagttttatatggattgtgttcttcacgatgtaagagagctt
tttgctgatgagttccagatcagagtaagtgaccccactacaattttttctgaaacatgc
acggaaatgtcatttaccagtattcccgccaaaacttcaaatgattcattttctatttcc
atcattgcagaaccagtcaacgatcccgacttgagcaatgcgattgagtctggtgtacta
catgcgaatttatcgagaaaggaaatggcaactattttaaagacacagtttgggtgggat
gcgctagctgcaaggtctgtatgggtgtttggtccaaaagatcttatcgaacccgatata
ttaattgatgactcatttcaaggagaaacggataaacaacagttgatgaagttgaaggag
tctatttgttcaggattcgagtgggctattgccgagggtcctttaatggcagagaccatc
cgaaacactaaatttaagattcttgaagctaagttcaaactggacgacttggcttcttat
actccagcacaaattatacctgtcattcagagagcttgctatactggtttccttacagca
cagcctagattgatggagcctgtttatcgattagatgcaatttgtttctacaaaaacatt
agagtagttgacgagttactcaaaagtagaagggggcatattgaaacacgcgacccaatc
gaagggactgctcttcattacattgtcggttatataccagtcgtggatagttttggattt
gcgtcagatgtgaagttgtacacatatcgtaacgcaaatacgtggttgctgttttcccat
tggagtatagttccaggagatccttttgatttggtctgcgagttacctcgtctcaaacca
gcacccgtggagtcattatcacgggactttttactaaaaacaagacataggaaaggattg
actggtgaacctactttacaaaaatacatagactcggagatttacgataaattaaaagag
cgtggattggtggcgtga
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