KEGG   Lodderomyces elongisporus: PVL30_002035
Entry
PVL30_002035      CDS       T01116                                 
Symbol
HRT1
Name
(RefSeq) RING-box protein hrt1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
lel  Lodderomyces elongisporus
Pathway
lel03420  Nucleotide excision repair
lel04111  Cell cycle - yeast
lel04120  Ubiquitin mediated proteolysis
lel04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    PVL30_002035 (HRT1)
   04120 Ubiquitin mediated proteolysis
    PVL30_002035 (HRT1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    PVL30_002035 (HRT1)
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    PVL30_002035 (HRT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lel04121]
    PVL30_002035 (HRT1)
   03400 DNA repair and recombination proteins [BR:lel03400]
    PVL30_002035 (HRT1)
Enzymes [BR:lel01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     PVL30_002035 (HRT1)
Ubiquitin system [BR:lel04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   PVL30_002035 (HRT1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     PVL30_002035 (HRT1)
   Cul2 complex
     PVL30_002035 (HRT1)
   Cul3 complex
     PVL30_002035 (HRT1)
   Cul4 complex
     PVL30_002035 (HRT1)
   Cul7 complex
     PVL30_002035 (HRT1)
   Cul8 complex
     PVL30_002035 (HRT1)
   Cul9 complex
     PVL30_002035 (HRT1)
DNA repair and recombination proteins [BR:lel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      PVL30_002035 (HRT1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      PVL30_002035 (HRT1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-RING_UBOX Beta-Casp zf-C3HC4_4
Other DBs
NCBI-GeneID: 5234625
NCBI-ProteinID: XP_001527232
UniProt: A5DXH4
LinkDB
Position
2:join(1924886..1924916,1925066..1925152,1925303..1925523)
AA seq 112 aa
MAEDDRMDIDEVEKPKEVSKTSKPKFEVKKWTAVAFWSWDIQIENCAICRNHLMEPCIEC
QPNSMANGGEECIAAWGMCNHAFHLHCIKRWLKTRNACPLDNTEWVYQKFGK
NT seq 339 nt   +upstreamnt  +downstreamnt
atggcggaagatgacaggatggatatagacgaggttgaaaagccaaaggaggtatcgaag
acttcaaaacctaaatttgaagtaaaaaaatggacagctgtggcattttggtcctgggat
attcagattgaaaattgtgcaatttgcagaaatcatttgatggaaccatgtattgaatgc
caacccaattcgatggctaatggaggcgaggaatgtattgccgcatggggaatgtgtaat
cacgctttccatctacattgcatcaagagatggctaaagacgagaaatgcttgtcctttg
gacaatacagagtgggtttatcagaagtttggaaagtag

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