Lodderomyces elongisporus: PVL30_003498
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Entry
PVL30_003498 CDS
T01116
Symbol
SNU13
Name
(RefSeq) RNA binding protein snu13
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
lel
Lodderomyces elongisporus
Pathway
lel03008
Ribosome biogenesis in eukaryotes
lel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVL30_003498 (SNU13)
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVL30_003498 (SNU13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lel03041
]
PVL30_003498 (SNU13)
03009 Ribosome biogenesis [BR:
lel03009
]
PVL30_003498 (SNU13)
Spliceosome [BR:
lel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PVL30_003498 (SNU13)
Ribosome biogenesis [BR:
lel03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
PVL30_003498 (SNU13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
RNase_P_pop3
Motif
Other DBs
NCBI-GeneID:
5233116
NCBI-ProteinID:
XP_001526091
UniProt:
A5DZ62
LinkDB
All DBs
Position
4:complement(926833..927213)
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AA seq
126 aa
AA seq
DB search
MSAPNPKAFPLADSALTQQILDVAQQAQNLRQLKKGANEATKTLNRGISEFIIMAADAEP
IEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASVTSNDASSIKNQIYGIKDK
IETLLI
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaccaaaccctaaggctttcccattggcagactctgccttgacgcaacaaatc
ttggatgttgctcaacaagcccaaaacttgagacaattgaagaaaggagctaacgaggct
accaaaactttgaacagaggtatttctgagtttatcattatggctgctgatgccgagcct
attgaaatcttgttgcacttgccattgttgtgtgaagataagaacgttccatacgttttc
gttcctagtaaggctgctttgggtagagcatgtggtgtttcaagaccagtcattgctgct
tcagtcacttcaaacgatgcttcatcaatcaagaaccaaatctacggtattaaggataag
attgaaacattgttgatttag
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