Lodderomyces elongisporus: PVL30_003540
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Entry
PVL30_003540 CDS
T01116
Symbol
thp1
Name
(RefSeq) uracil DNA N-glycosylase Thp1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVL30_003540 (thp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_003540 (thp1)
Enzymes [BR:
lel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
PVL30_003540 (thp1)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVL30_003540 (thp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CNDH2_M
Motif
Other DBs
NCBI-GeneID:
5233000
NCBI-ProteinID:
XP_001526135
UniProt:
A5DZA6
LinkDB
All DBs
Position
4:complement(1035144..1036082)
Genome browser
AA seq
312 aa
AA seq
DB search
MMNKSLKTVIETFKYEGDDKAKKNLENVSKSIKSVKVNKRVTSSRRSSTKVKSTSIIHKS
NASATYNVSNSPSKAQKVKIDTSKLPDLRHSLNSNLKLLFVGYNPGVQSSIQQHHYAHHS
NLFWKLFNQANVLQRVVQKRKKKENGMHQKVFDDDDDDDKYLKTLLSTGCSAIHDFDLIK
YDIGFSDLSLRCTVRAEELTSEEKIANIPRLIREINESNAENVVLIGKGIWEVIVKFYKA
QLGIKFQLNKDNFQWGQIAESKDKQYNQIIEHVYAQLPKHTTIYAFPSTSGLVASMKFSE
KLRLWQEMANNL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaaaagccttaagactgttatcgagacgttcaagtatgaaggagatgacaag
gccaaaaagaacctagagaatgtgctgaagtcaataaaaagtgtgaaagtcaataaacgc
gtcacaagttcaaggcgactgctgactaaagttaaatctacctccattattcataaatca
aatgctagtgccacatacaatgtgagcaattcacctctgaaagcacagaaagtgaagata
gatacttctaaactaccagatttaagacattctctcaactctaatctcaagctcctattt
gttggatacaatcctggagttcagtcctcaatacagcagcatcattacgcgcatcattcc
aatttattctggaaattattcaaccaagcaaatgttttacaaagagttgtacaaaaaagg
aagaaaaaggagaatggcatgcatcaaaaggtgtttgatgatgatgatgatgacgacaag
tatctcaaaactttattatctacaggatgttcggctattcatgatttcgatttgatcaaa
tatgacattggattttctgatttgtcattgagatgcactgttcgagccgaagagttgacc
tcggaggagaaaatcgccaatattcctcgccttattcgggaaataaacgaaagtaacgcc
gaaaacgtcgtgctcattggaaaagggatatgggaagtcattgtcaagttttacaaggca
cagttaggaatcaagtttcaactcaataaagacaatttccaatggggtcagattgcggaa
agcaaagataaacagtacaatcagattatcgagcatgtttatgcacaacttcccaagcac
accacaatatatgcattccccagtacttcggggctagtggcaagcatgaaattttctgag
aaactccggctttggcaagaaatggctaataatttataa
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