KEGG   Leptolyngbya sp. NIES-3755: LEP3755_03040
Entry
LEP3755_03040     CDS       T04199                                 
Name
(GenBank) base excision DNA repair protein, HhH-GPD family
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
len  Leptolyngbya sp. NIES-3755
Pathway
len03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:len00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LEP3755_03040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:len03400]
    LEP3755_03040
Enzymes [BR:len01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LEP3755_03040
DNA repair and recombination proteins [BR:len03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LEP3755_03040
 Prokaryotic type
     LEP3755_03040
SSDB
Motif
Pfam: HhH-GPD RF-1 HHH
Other DBs
NCBI-ProteinID: BAU09829
UniProt: A0A0S3TX71
LinkDB
Position
332869..333579
AA seq 236 aa
MRSKTSIVTPEIQEKLIQIHDRLCKEYGCPIPYFHSLDPLSELVSALLSHRTKNADSDRA
FKRLKAKFPTWEAVREASEKEIEREIISCTWADQKAIRLKQILQQITEQRGELSIDFLAD
LSVEEARSWLESFPGIGRKTSAAVLAFSNLRRRALPVDSHHHRVAIRLGLIPETTAVAPA
HDLLEAQLPPEWTAQQVYDNHEVLMLHGQRCCFYRNPTCDRCVLLSLCPHGQSRLG
NT seq 711 nt   +upstreamnt  +downstreamnt
atgcgatcgaaaacttccatcgtcacgcccgaaatccaggaaaagttgattcaaattcac
gatcgcttatgcaaagaatacggctgtccgattccttattttcacagcctcgatccctta
agcgaattagtttcggctctgttatctcatcggacgaaaaacgcagattccgatcgagca
ttcaaacgattaaaagcaaagtttccaacctgggaagcggttcgagaggcttcggaaaaa
gagatcgaaagggaaattatctcttgcacctgggcagaccaaaaagcgattcgactgaaa
caaattttgcagcagatcaccgaacagcgaggcgaattatcgatcgactttctagctgat
ctaagtgtagaagaagcccgaagctggctcgaatctttccccggaattggacgaaaaacg
agcgctgccgttcttgcctttagcaatctgcgaagacgtgctttacctgttgatagtcat
catcaccgagtcgccatccgattaggattgattcctgaaacaacagcggtcgcgcctgca
cacgatttattagaggcacaattgccgccagaatggacagcccaacaggtttacgacaac
cacgaagtattgatgctacatggacagcgctgttgtttttatcggaatccgacgtgcgat
cgctgcgttctcctttccctttgtccccacggtcaatctcgattagggtaa

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