KEGG   Leptolyngbya sp. BL0902: GFS31_32940
Entry
GFS31_32940       CDS       T10598                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
lepb  Leptolyngbya sp. BL0902
Pathway
lepb03030  DNA replication
lepb03410  Base excision repair
lepb03420  Nucleotide excision repair
lepb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lepb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GFS31_32940
   03410 Base excision repair
    GFS31_32940
   03420 Nucleotide excision repair
    GFS31_32940
   03430 Mismatch repair
    GFS31_32940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lepb03032]
    GFS31_32940
   03400 DNA repair and recombination proteins [BR:lepb03400]
    GFS31_32940
Enzymes [BR:lepb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     GFS31_32940
DNA replication proteins [BR:lepb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GFS31_32940
DNA repair and recombination proteins [BR:lepb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     GFS31_32940
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GFS31_32940
   MMR (mismatch excision repair)
    DNA ligase
     GFS31_32940
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      GFS31_32940
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia DNA_ligase_ZBD PTCB-BRCT BRCT_2 DUF6752 DUF3420
Other DBs
NCBI-ProteinID: QQE66594
UniProt: A0A7T5E5Y1
LinkDB
Position
complement(3513666..3515723)
AA seq 685 aa
MESDHHTAAPASDLAALEARIGDLRRQLQTASYAYYVLDDPTMPDEVYDRLYRELQDLET
AHPHLITADSPTQRVGEKPATQFTSVQHNIPLYSLENAFDLAEFRAWEDRWRRQAPEVGK
AAYVAELKIDGNALALTYENGILTRAATRGDGVSGEEITQNVKTIRSVPLRLQLENPPPV
VEVRGEAFLPLDVFEQINQERLSRDEAPFANPRNAAAGTLRQLDSKIVAQRKLDFFAYTL
HGLEAESETQWQALDLLQRLGFRVNPNRQLCQSETEVQAYYDRWATERATLPYMTDGVVV
KLNDIALQERLGFTQKFPRWAVAMKYPAEEVPTVLESVSFQVGRTGAVTPVAELRPVSLA
GTTVARATLHNAERLAELGIHQGDTVIVRKAGEIIPEVVRVMAELRPATATPVTMPTHCP
ECASELVKPDEEAVTRCINSACPAIVQGAIIHWARRDALDIEGLGEKWVKQFVERGLVQS
VADLYDLTTEKLLPLDRMGPQLAEKLVNAIAASKTRPWAAVLYGLGIRHVGTVNAKTLTQ
AFSSVEALAAADTEAISAVHTIGPEIAQSVADWFHLPENRVLIERLQRAGLQLAAEDSAP
ESAPGPLAGKTFVLTGTLPSLSRTEAAAKIEAAGGKVTSSVSKATDYVVAGEKAGSKLEK
AEKLGISVLSEVDLLGLLNQDFPRP
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggagtctgaccatcacaccgccgcccccgcgtctgaccttgctgctctggaagccagg
ataggtgatctgcggcgacagcttcagacggctagctatgcctactacgtgctggatgat
cccaccatgcccgacgaggtgtacgaccgcctctaccgggaactgcaagacctggaaacg
gcccatccccacctaatcaccgccgacagccccacccagcgcgtgggcgaaaaacccgcc
acccagttcacctcggttcagcacaatatccccctctacagcctggagaacgcctttgac
ctggcagaatttcgggcctgggaagaccgctggcgcagacaggcccccgaagtaggcaaa
gcggcctacgtggcggaactgaaaattgacggcaacgccctcgccctcacctacgaaaac
ggcatcctcacccgtgcggccacccgtggggatggggtgtctggggaagagattacccaa
aacgtcaaaaccattcgctccgtgcccctgcgcctgcaactggagaacccgcccccggtg
gtggaggtgcgcggcgaagcctttctgcccctggacgtattcgagcaaatcaaccaagag
cgcctcagccgggatgaagccccctttgccaacccccgcaacgccgccgccggaaccctg
cgccagctagattccaaaatcgtcgcccagcgcaaactcgacttcttcgcttacaccctc
cacgggttagaagcggaatcggaaacccaatggcaagccctcgacctgctccagcggttg
gggtttcgggtcaaccccaaccgtcagctctgccagtcggaaactgaggtgcaagcctac
tacgaccgctgggccacggaacgcgccaccctgccctacatgaccgatggcgtggtggtg
aagctaaacgacattgccctgcaagagcggctgggctttacccaaaagtttcctcgctgg
gccgtggcgatgaaataccccgccgaagaagtgcccacggttctagagtccgtcagcttt
caggtgggccgaaccggggcggtaacgcctgtagccgaactgcgtccagtgtccctagcc
ggaaccaccgtcgcccgtgccaccctccacaatgccgaacgactggcggaactgggcatc
caccagggcgatacggtgatcgtccgcaaggccggagaaattatcccggaggtggtgcgg
gtgatggcggaactgcggcccgccacggccacccccgtcaccatgcccacccactgcccc
gaatgcgcctcggaactggttaagcccgacgaggaagccgtgacccgctgcatcaatagc
gcctgtccggccattgttcagggggccatcattcactgggcgcggcgcgatgccctggat
attgagggccttggggaaaagtgggtgaagcagtttgtggagcgagggctggtgcagtcc
gtcgccgatttgtatgacctgacgaccgaaaaactgctacccctcgaccgcatggggcca
caactggcggaaaagttggttaacgccatcgccgcatctaagactcgcccctgggcggcg
gtgctctatgggctggggattcgccatgtgggcaccgtcaacgccaaaaccctgacccag
gcattttcttccgtggaagccctcgccgccgccgataccgaggcgatctccgccgtccac
accatcggccccgaaattgcccaatcggtggcggattggtttcatctgcctgaaaatcgg
gtgctaattgaacggttgcaacgggccggacttcagcttgccgccgaggacagtgcccca
gaatccgcccctggccccctggcaggcaaaaccttcgtcctcaccggaaccctgcccagc
ctcagccgcaccgaagccgccgccaaaattgaggccgctgggggcaaagtcaccagcagc
gtcagcaaggccacggattacgtcgttgcgggcgaaaaggctggttctaagctggaaaag
gcggaaaaactaggcatctctgtcctttccgaagttgacctcctgggcttgctgaatcaa
gactttccccgcccctaa

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