Leptolyngbya sp. IPPAS B-1204: EDM05_020105
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Entry
EDM05_020105 CDS
T10888
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lepi Leptolyngbya sp. IPPAS B-1204
Pathway
lepi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lepi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EDM05_020105 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lepi03400
]
EDM05_020105 (nth)
Enzymes [BR:
lepi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EDM05_020105 (nth)
DNA repair and recombination proteins [BR:
lepi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EDM05_020105 (nth)
Prokaryotic type
EDM05_020105 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RHH_8
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
XPM61242
LinkDB
All DBs
Position
complement(2251735..2252409)
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AA seq
224 aa
AA seq
DB search
MGTKKQRASEILTRLKRLYPEAPCTLNYETPVQLLVATILSAQCTDERVNLVTPELFRRF
PDAPAMASADLSEIEQLVRSTGFYRNKAKNIQAACRMIVSEFGGEVPQSMDELLKLPGVA
RKTANVVLAHAYGIHAGVTVDTHVKRLSQRLGLTKETDPIRIERDLIKLLPQPDWENWSI
RLIYHGRAVCNARNPACGSCVLADLCPAADLTKALPVLPQAISP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ctgggaaccaaaaaacaaagggcgtcggaaatcttaactcggttgaagcgcctctatcca
gaagctccctgtacgctcaactatgaaacgccagttcagcttttggtggcaacaatcctt
tcggcccagtgcactgacgaacgggtcaatctagtcacgccagaattgtttcgccgcttt
cccgatgcgcccgcgatggccagcgctgacctgagtgagatcgaacaattggtgcgctct
accggcttctaccgcaacaaagctaaaaatattcaggccgcttgccgcatgattgtcagc
gaatttggtggagaggtgccccaatcaatggatgagctgctgaagctgcctggagtggct
cgcaagaccgcgaatgtggttttggcccatgcttatggcattcacgcaggcgtcactgtg
gatactcacgtcaaacggctaagccaacggttgggcctcaccaaagaaactgatccgatt
cggattgagcgcgatttgatcaaactgctgccccaacccgactgggaaaattggtcaatc
cgactaatttaccacgggcgggctgtgtgcaatgctcgtaaccctgcctgtggcagttgc
gttttagctgatttatgtcctgctgcggatttaaccaaagccttgccggttcttccccaa
gccatatcgccctga
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