Leptolyngbya sp. 7M: JVX88_01635
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Entry
JVX88_01635 CDS
T09998
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lept
Leptolyngbya sp. 7M
Pathway
lept01501
beta-Lactam resistance
lept01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lept00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JVX88_01635
01503 Cationic antimicrobial peptide (CAMP) resistance
JVX88_01635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lept02000
]
JVX88_01635
01504 Antimicrobial resistance genes [BR:
lept01504
]
JVX88_01635
Transporters [BR:
lept02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JVX88_01635
Antimicrobial resistance genes [BR:
lept01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JVX88_01635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
zf-SCNM1
Patched
DUF5337
Motif
Other DBs
NCBI-ProteinID:
QYO65514
LinkDB
All DBs
Position
complement(344032..347292)
Genome browser
AA seq
1086 aa
AA seq
DB search
MQWLAEICVHRPVFATVIVLFLTVVGGFSFFTLGVDRFPKIDLPTISVRTSNPGAAPEEI
ESEITDVVEAALNTVPGVEEMRSSSSRGSSNVTLTFNLEKNPDVAFQEVQQKLSGVIGRL
PDSADPPVAQKADPDSQPVLLYVVSAPRTPVELTEQVETLIRERIESADGVGEVFMWGAR
TPQILVSVNPERLRAYNIAVTDVSAAIRAQNQELPGGNLVEGQRTLGVRTLSKLTEVEQF
NELVVATRNGYPIKIRDIGKVEKTGGEPSSAASLDGVQSVSVGIRKQAGANTIAVINNVK
QRMENIIPTLPSDMKVAIIRDQSEFIENSLHAIEEHLILGGLFAAIIVFFFLWNFRSTII
SALAIPISIIAAFAAIAAFGYSLNQMTMLALTLMVGIVIDDAIVVLENIYRFVEEKGMDP
FQAAIEGTREIGLAVLATTLSLLAVFIPVGFMTGIVGRFMSSFGLTAAAAIAVSLIVSFT
LTPMLAARWIKKPKHENRVEDEDSGGSTAKAAGESKSGWFWQKIDTAYTFMLRLAMRFRW
AVVLICIATVVSIVPLYKFVGMAFLPDEDESLFQVNLRGPQGTSLSATQSILDRIARDIR
AEIPGVKNTLVLAGFGRGSGPNNGFINVALVPVSERKESQSDLINRTRQIARKYASKEYS
VTVSASSSIAGSIGLGRGGSAVGMYLAGPDMARLNEYANALVERMKQDPIFRDPDNSVEI
GTPEIRVVIDRTRAADLGVRAGDVAQALNILAAGQRISTYSEGSKQYDVVVRADEPFRRD
RNNFNLFSVASSNGGIIGLDRVVKLEEGLAPSSISRLNRQRQVTVSAGLPPNSSEADALA
KLQSYVRDLQMPPEYSSGVTGQSKELEKAYESFMYAFLLSFVFMYLVLAAQFESFIHPVT
ILLTLPLAVPFALLSTAIAGQTLNIFSALGILLLFGIVKKNAILQIDHTNTLRAQGMSRY
DAIIQANRDRLRPILMTTLALVAGMIPLTLGSGAGAATNRSIGILVVGGQSLCLLLTLLA
VPVFYSLFDDAGETKIMRRISGSLSSVFSKIFRRDKVRDEFINERTAASVSSTQSGEGGI
EPEAAR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggttggctgaaatatgtgttcacaggcccgtattcgctacggtgatcgtgctt
ttcttgacggtcgtcggcggattcagcttttttacgctcggggtagataggttcccgaag
atcgatcttcccacaatatcagttagaacctcgaacccgggcgcggcgccggaagagatc
gaaagcgagataacagatgttgtcgaagccgcgctaaacaccgtccctggggttgaagag
atgcgttcgagctcttcaaggggtagctccaacgtaactcttacattcaaccttgaaaaa
aaccccgatgtcgcatttcaggaggtccagcaaaagctaagcggtgttattggccggttg
cccgatagtgccgatccgcccgtagctcagaaggcggatccagattcccaacccgtactg
ctttacgttgtgagtgcgcctaggacgccggtagagcttaccgagcaggttgagactctg
atccgagagcggatcgagtccgcggacggcgttggcgaggtctttatgtggggggctcgc
actccgcagatacttgtaagcgtaaatccggaaaggcttcgtgcttacaatattgctgta
accgacgtttcggccgcgatacgagcacagaatcaggagcttccgggcgggaaccttgtt
gaaggacagcggacactcggtgttaggaccttaagtaaattgactgaagtcgagcagttc
aatgaattggtcgtagcaacgcgtaatgggtatccaataaagatccgtgatataggaaag
gttgagaaaaccggcggcgaacccagttccgcggcatcgcttgacggagtccagtccgta
tcagtcgggatccgaaagcaagcgggtgcgaataccatcgctgttatcaataacgtaaag
cagcggatggaaaacatcatcccgacgctgccatccgatatgaaggttgcgatcatccgt
gaccaatcggaattcatcgaaaattcacttcacgcgatcgaagaacatttgatactcggc
gggctgttcgctgctatcatagttttcttctttctttggaatttccgctctacgataatt
tccgctcttgcgatacccatctcgatcatcgcagcctttgctgctatagcggcattcggg
tattcgttgaatcagatgacgatgttggccttgacgctgatggtcggcattgtcatcgac
gacgcaatagtcgttcttgagaacatctatcgttttgtcgaggagaaagggatggacccg
ttccaggccgcgatcgagggaactcgggagatcggcttggcagtgctcgcaacgactctt
tcgcttttggcagtctttattcccgtcggattcatgaccggtattgtgggccgattcatg
tcttcttttggccttaccgcagccgcagcgatagccgtttcactgatcgtttcatttacg
cttacgccgatgctcgcggcccgctggatcaaaaaaccgaagcacgagaatcgggtggaa
gacgaagacagcggaggctcaactgcaaaagcagccggcgaatctaaatccggctggttt
tggcagaagatcgatacagcctacacctttatgctgagattagcgatgcggtttcggtgg
gcggtggtccttatctgtatcgcgacggtggtctcaatagtcccgctttacaagttcgtt
ggtatggcgttcttgcctgatgaggacgaatcgctcttccaagtaaatttaagaggccca
cagggaacatcgctttccgcgactcagtcgatacttgatcggatcgcccgagacatcagg
gccgagatcccaggtgtaaagaatacactcgtgctagcaggtttcggacgcggatcgggt
ccaaacaatggatttataaatgttgcccttgtgccggtctccgagcgaaaggaatcacag
tccgatctgatcaatcgaacgcgtcagatagccaggaaatacgcttctaaggagtattcg
gtaacagtgtcagcgtcatcttcgatcgccgggagcattggtctcgggcgaggcggttcc
gcggtcggaatgtatctcgccggccctgatatggccagactcaacgagtatgccaatgcg
cttgttgaacggatgaagcaggatccaatatttcgtgaccctgacaattccgttgagatc
ggaaccccggagatacgggttgtgatagaccgaacgcgagcagcagatcttggggttcgt
gcaggtgatgtcgcgcaggcacttaatatccttgcggccggccagcgaatctcaacttat
agtgaaggctcaaaacaatacgacgtagttgtccgtgctgacgaaccattcaggcgagat
aggaataacttcaatctcttctcggtcgcctcatcaaatggcgggatcattggccttgat
cgcgtggtaaaactggaagaagggcttgccccatcatcgatcagccggttgaatcggcag
cgacaggtgactgtttcagcaggcctgccgccgaactcttcagaggcggatgctctcgca
aaactgcaaagttatgtacgcgaccttcaaatgccgcccgagtattccagcggcgtaact
ggtcaatcgaaggaacttgaaaaagcgtatgaatcatttatgtatgcttttcttctgtcc
tttgtgttcatgtatttggtgttggcggcgcaattcgaatcgttcattcatccggttacg
atattgctgacgcttccactggccgttccattcgcattgctttcgactgcgatcgcgggc
caaacgcttaacatattttcggcgctggggatcttgctgctattcgggatcgtaaaaaag
aatgcgatcctgcaaattgaccatacaaacacgcttcgcgcgcagggaatgagccgttat
gatgcgatcattcaggcaaatcgcgaccgacttcgtccgatcctgatgacgacgcttgcc
ttagttgccggaatgatccccttaacgctaggaagtggggccggagcggcgacgaaccgc
tctatcggcatcttggtcgtcggcggacaatcgctttgtttattgctaacgcttcttgcg
gtgccggtattctattcactttttgatgatgccggcgagacgaaaataatgcggcgaata
agcggatctttgagctcggtcttttcaaagatatttcgaagagacaaggttcgcgatgag
ttcataaacgaacgaacggccgcatccgtttcatcaacccaaagcggagaaggaggaatt
gagccggaagccgcacgttaa
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