Leptotrichia sp. oral taxon 498: BCB68_09470
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Entry
BCB68_09470 CDS
T04995
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
leq
Leptotrichia sp. oral taxon 498
Pathway
leq03030
DNA replication
leq03410
Base excision repair
leq03420
Nucleotide excision repair
leq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCB68_09470
03410 Base excision repair
BCB68_09470
03420 Nucleotide excision repair
BCB68_09470
03430 Mismatch repair
BCB68_09470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leq03032
]
BCB68_09470
03400 DNA repair and recombination proteins [BR:
leq03400
]
BCB68_09470
Enzymes [BR:
leq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BCB68_09470
DNA replication proteins [BR:
leq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BCB68_09470
DNA repair and recombination proteins [BR:
leq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BCB68_09470
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCB68_09470
MMR (mismatch excision repair)
DNA ligase
BCB68_09470
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BCB68_09470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
BRCT_2
HHH
RNA_ligase
HMBD
HHH_3
Rad50_zn_hook
YcaO_C
UPF0758_N
zf-tcix
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
ASQ49132
UniProt:
A0A222PB77
LinkDB
All DBs
Position
1931794..1933848
Genome browser
AA seq
684 aa
AA seq
DB search
MKKIKKEKEKEKMNSLDNEILKNYTNLKNKIEKYNNLYYNEDNPIISDMEYDGLLRKLKE
MEKEYPTLLEIDDSPTEKIGGTASNKFSKVEHKVPMLSLSNTYNIAEIEDFDKRVKKIIN
FSEKIEYILELKLDGLSISLIYENGNLTRAVTRGDGKIGEDVTENIMEIESIPKKLKEPI
SLEVRGEIILPIPNFNKINEEREENGEEVFANPRNAAAGTIRQLDSTIVSKRGLDCYLYY
LVNAENYGIKTHLESIKFIEKLGFKTTKVFEKYSDFKTLEKSIEKWRIKREKLDYETDGL
VIKINDFSFYETLGYTTKSPRWAIAYKFPAEQVKTRLLDVTFQVGRTGVVTPVAELEAVN
LSGSVVKRASLHNFDEIRRKDIKIGDNVIVEKAAEIIPQVVNVVFDDRKGTEKEIKEPES
CPVCGTKLVKEEGLVALKCLNPHCPEKIKREISYFVSRDAMNISGLGEKIVEKFIELEKI
KTVVDIYFLGNYRNELENLEKMGKKSVENLLNSINESKNQDFSKVLYALGIPFVGKFNAN
LLSKTFKDIDVLKEKSVEELLEVKGIGEKAAIAVNTFLNNENNWKIITELKEIGLKFKFE
GNEIKEVKDNPIKGKNFLATGKLQKYKRNEIKDIILEKGGNYLSAVSKNLDFLIAGEKAG
SKLEKAQNLGIRVLSEDEFEKEFL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
ataaaaaaaatcaaaaaagaaaaggaaaaagaaaaaatgaactcacttgataatgaaata
ttaaaaaattatacaaatttgaaaaacaaaattgaaaaatataataatctttattacaac
gaagataatccaattatttcagatatggaatatgacggactcttgcgaaagttaaaagag
atggaaaaagaatatcccactcttttagaaattgatgattctccgactgaaaaaattgga
gggactgcgagtaataaattttctaaagttgaacataaagttcctatgctaagtttgtca
aatacttataatatcgctgaaatcgaagattttgacaaaagagtgaaaaaaataattaac
ttttctgaaaaaattgaatatattctggaactgaaattggacggacttagtatcagcctt
atttatgaaaatgggaacttaacgagagcagtcactcgtggtgacgggaaaattggagaa
gatgtgacggaaaatattatggaaatcgaatccattccgaagaaactgaaagagccgatt
tcgctggaagttcgtggagaaattattttgcctattccaaattttaataaaataaatgaa
gagcgggaagaaaatggggaagaagtttttgcaaatccaagaaatgctgctgctggaaca
attagacaactggattccacgattgtttcaaaaagagggcttgactgctatctctattat
ttggtcaatgcggaaaattatggaattaagactcatctggaaagtattaaatttattgaa
aagctgggatttaagacaactaaagtttttgagaaatattccgactttaaaactcttgaa
aaatctattgaaaaatggcgaataaaaagagaaaaattggattatgaaaccgacgggttg
gttataaaaataaatgatttctcattttatgaaactttgggctacacgacaaaaagtcca
cgatgggcaatcgcttataaatttcctgctgaacaagttaaaacaagacttttggatgta
acttttcaagtgggaagaacgggagttgtgacacctgttgcagagctggaagctgtgaat
ttatcggggtcggttgtaaaaagagctagtcttcataactttgatgaaattcgtagaaaa
gatataaaaattggtgacaatgtgattgtcgaaaaagcggcggaaattataccgcaagtc
gtaaatgtcgtatttgatgacaggaaagggactgaaaaagaaataaaagaacctgaaagc
tgtcctgtttgtggcacaaaacttgtaaaagaagagggccttgttgcgctaaaatgctta
aatccacattgtcctgaaaaaattaaaagagaaatttcctactttgtgtcaagggatgcc
atgaatatttcaggtctgggagaaaaaattgtagaaaaatttattgaacttgaaaaaatt
aaaaccgtagtcgatatttattttttgggaaattatcgcaatgaattagaaaatttggaa
aagatggggaaaaaaagtgttgaaaatttgttaaacagcataaacgaaagtaaaaatcag
gacttctccaaagttctgtatgctcttggaatcccatttgttgggaaatttaacgccaac
cttttgagtaaaacttttaaagatattgatgttttaaaagaaaagtcagttgaagaactt
ttggaagtaaaaggaattggagaaaaagctgcaatcgccgtaaacacttttttaaataac
gaaaataactggaaaattattacagaacttaaagaaattggcttaaaatttaaatttgaa
ggaaatgaaataaaagaagttaaagacaatccgataaaagggaaaaatttccttgcaact
ggaaaattgcaaaaatataaacgaaacgaaataaaagatataattttagaaaaaggtgga
aattatttatctgccgtttcaaaaaatttggattttttaattgctggagaaaaagctgga
agtaagttagaaaaagctcaaaatttaggaattagagtgctaagtgaagatgaatttgaa
aaagaatttttataa
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