Leucoraja erinacea (little skate): 129694202
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Entry
129694202 CDS
T09122
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04010
MAPK signaling pathway
leri04137
Mitophagy - animal
leri04141
Protein processing in endoplasmic reticulum
leri04210
Apoptosis
leri04217
Necroptosis
leri04621
NOD-like receptor signaling pathway
leri04622
RIG-I-like receptor signaling pathway
leri04920
Adipocytokine signaling pathway
leri05132
Salmonella infection
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129694202
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129694202
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129694202
09143 Cell growth and death
04210 Apoptosis
129694202
04217 Necroptosis
129694202
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129694202
04622 RIG-I-like receptor signaling pathway
129694202
09152 Endocrine system
04920 Adipocytokine signaling pathway
129694202
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129694202
09171 Infectious disease: bacterial
05132 Salmonella infection
129694202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129694202
04121 Ubiquitin system [BR:
leri04121
]
129694202
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129694202
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129694202
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129694202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
129694202
NCBI-ProteinID:
XP_055486892
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MVALVSGISPVDPIASSCLLCSACRSLLIKPKQTECGHRYCTACLENLFRTGNEADCYVC
QKKVLRSKVYLDRAAENDAHATTIRCTAHLEGCDWVGSLRNFLRTHRAKCDFHMVPCANV
AFGCQVFGPRREMELHESRECGWRMECCPHCETFCVHNMLEDHVATCGKQESCPHCGETD
LTKTELEQHCDPLLGACPKLKVACPFKEVGCSVQLPRHEMAAHLRSSQESHLLLLLSLAT
SLRPGAPVEGGGTSQDSARTPAGEGPEGEVVPGAGPGLHSLAGRADNLERWVCGLNKDLD
RYAQVIEVLQQKCLQYEQVIQGLQTKGGHGEGPGGSGPVSTDGVLVWKIKNFSAHLSAAK
AGQRPSFYSPHFTTHPFGYRMCCRIYPNGDGSGKGSHVSLFLTLVRGEYDEVLPWPFRQK
VTFMLLDQAGQKHLKESFSPDSLSGSFQKPRSHMNVASGCPTFAQHALLHKGPCQYLKND
TIYIKVLVDPIAVQM
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccttggtgtccggcatcagcccggtggatccgatcgccagctcctgccttctg
tgctccgcctgccgctccttgctcatcaagcccaagcagaccgaatgtggccatcgctac
tgtacagcctgtctggagaacctcttcaggacaggaaatgaagcagattgctacgtttgt
caaaagaaagttctacgttctaaggtttacctggacagggctgcggaaaatgatgcccac
gccactacgattcgctgcacggctcacttagagggctgtgactgggttggatcactgcgg
aactttctgcgcacgcaccgtgccaagtgcgatttccacatggtcccctgcgccaatgtg
gcctttggctgccaggttttcggccccaggagggagatggagcttcacgagagccgggag
tgtggatggcggatggaatgctgtccgcactgcgagaccttctgtgtccacaacatgctg
gaggatcacgtggcaacctgtgggaaacaggagagttgccctcactgtggagagaccgac
ttaacaaagaccgagttggagcaacattgtgaccctctccttggcgcctgtcccaagttg
aaggtggcctgtccctttaaggaggtcggctgttcagtccagctcccacgacatgaaatg
gccgctcatctccgatcatcccaggagagtcatctcctgctcctcctctccctggccacc
agtctccggcccggggcacctgttgaggggggaggaacgtctcaggattctgcccggaca
ccggccggagagggtccggagggcgaggtggtcccgggggcagggcccggcctgcattcg
ctggccggccgggcggacaacctggagaggtgggtgtgcgggctcaacaaggacctggac
cgctacgcccaggtgatcgaggtcctccagcagaagtgcctccagtacgagcaggtcatc
cagggcctgcagaccaaggggggccacggcgagggtcccgggggctcggggcccgtcagc
accgatggagtcctggtgtggaagatcaagaacttctccgcccacctctctgcggccaag
gccggccagcgaccatcattctattcgccccacttcaccacccacccattcggctaccgg
atgtgctgccggatctaccccaacggagacgggtcgggcaagggaagccacgtctcgctc
ttcctgacgttggtgaggggggagtacgacgaggtcctcccctggcccttcaggcagaag
gtgaccttcatgctcctggaccaagccgggcagaagcacctcaaggagtccttctccccc
gactccctgagcggctccttccagaagcccaggagccacatgaacgtggccagcggttgt
cccacctttgcccaacatgccctcctgcacaagggaccttgccagtatctcaagaacgac
accatctacatcaaggtgctggtggaccccatcgcagtgcagatgtga
DBGET
integrated database retrieval system