Leucoraja erinaceus (little skate): 129694463
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Entry
129694463 CDS
T09122
Name
(RefSeq) antigen peptide transporter 1-like
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri02010
ABC transporters
leri04145
Phagosome
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129694463
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129694463
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129694463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leri02000
]
129694463
Enzymes [BR:
leri01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
129694463
Transporters [BR:
leri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
129694463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
WCOR413
Motif
Other DBs
NCBI-GeneID:
129694463
NCBI-ProteinID:
XP_055487155
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MALPVFLLSLAVLDVTISWVLSGALRQWWMGPLLQLWLWGVMRLAVLSVCLQPLVRMKGS
WLAELWPAVATCCLLLPTYNSLALATGSTHAELLHAPLTTRLLLTYLATALGLVVAHRFL
PQTEAQTPGQTPATASIARLLSCLRPDLKRFLLVAVFVVLSSAGEMAVPYYSGRLTDRVK
SGEGETAFTSTILTMAAFSIGSAVMEFICDQTYNTTMTGIHTRIQGSVFRSVLHQDIKFF
DTVHTGEITSRVTSDTNTMSESLTEQLSLLMWYLTRAVCLLLFMFSQSYRLSLCTLVLIP
FIIILPEFVAQFYQGLTAEVQTSLAKANDVATETLSAMRTVRSFANEAGECERYKQRLED
TYRLNKKEAVLYAIYMWTSSLSGLLLKVCVLCYGGLLVAEGNVTSGGLVSFILYQMQFTS
AVEALLRFYPQVKKAVGASEKVFEYMDLQPALALQGTLAPATLGSHIQFHNVTFAYPNQP
DVAVLKVSWFVP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgccagtgttcctgctgtcactggccgtgttggatgtgaccatcagctgggtg
ttgagtggggcactgcggcagtggtggatggggccgctgttgcagctttggctgtggggt
gtgatgcgtctggctgtgctgtctgtctgcttgcagccgctggtccgtatgaagggcagc
tggctagccgagctgtggccggcagtggccacctgctgtctgctgctgcccacctacaac
agcctggcactggccactggctccacccacgctgagctcctgcacgcccccctcaccacc
cgcctgctcctcacctacctggccactgccctggggctggtggtggcccaccgcttcctg
ccccagacggaggctcagacaccgggccagacgcctgccacagcctccatcgccagactg
ctgtcctgtctgcggccagatctcaaacggttcctcctcgtggccgtcttcgtggtcctg
tcctcggctggagagatggccgtaccctactattcgggccggctcaccgacagggtgaag
agtggggaaggggagacggccttcaccagcaccatactcaccatggccgccttcagcatt
ggaagcgctgttatggagtttatctgcgaccagacctacaacaccacaatgactgggatt
cacacccgcattcagggctccgtcttcagatctgtgctacaccaggatatcaaatttttc
gacacggtccacacaggtgagatcacgtctcgcgtcacctcggacaccaacacgatgagt
gagtcgctgacggagcaactgagcctgttgatgtggtacctgaccagggccgtgtgtttg
ctgctcttcatgttcagccagtcctaccggctctccctctgcaccctcgtactcatcccc
ttcatcatcatcctgccggagtttgttgcacagttctaccagggcctgacggcagaggta
cagacatctctggccaaggcgaacgacgtggcgacagagacgttgtcggccatgcggacg
gtgcgcagcttcgccaacgaggcgggcgagtgcgagcggtacaagcagcggctggaggac
acgtaccgcctcaacaagaaggaggccgtgctctacgccatctacatgtggaccagcagc
ctgtctgggctactgctgaaggtgtgtgtgctgtgctatggggggcttctggtggccgag
ggcaacgtcaccagcgggggtctcgtctcgttcatcctgtaccagatgcagttcacctcc
gccgtcgaggccctgctccgtttctaccctcaagtgaagaaggcagtcggtgcctcggag
aaggtgtttgagtacatggatctccagcctgccctggcccttcagggaactctggcccca
gcgacactgggttctcacatccagttccacaacgtcaccttcgcctaccccaaccaacct
gatgttgccgtgctgaaggtgagctggttcgttccctag
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