Leucoraja erinaceus (little skate): 129695420
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Entry
129695420 CDS
T09122
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129695420 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129695420 (c9orf72)
Membrane trafficking [BR:
leri04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129695420 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
129695420
NCBI-ProteinID:
XP_055488326
LinkDB
All DBs
Position
3:27884935..27936760
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AA seq
461 aa
AA seq
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MCAACPPQSPAVAKTEIMLDGDSPLLAATFAYWDNILGPRVRHIWAPKCEQLLLSDGEIT
FLANHTLNGEILRSAKSGAIDVKFFVLSEKGVIIISLIFDGNMNGDRSTYALSVILPQTE
LGFYLPLHRLCVDRLTHIIRKGRIWMYKGQSIISFLTTEITPIMELFSSMKTHGVPQEVQ
IKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSVVVGSNPLKVNKMVRTLCLFLTPTER
KCSRLANTSGSFKYNSGLFVQGLLKDSTGSFVLPYRQIMYAPYPTTHIDVDVNTVMQMAP
CHEHIYNQQNYMSMELVTLQKTASEDVEIPDTLIHMDEGFTPNLNIFQDVMNRDTLVKSF
LDQIFQLKSGLSLRNVFLAQFLLVLHRKAQTVIKYIEDETQRGKKPFKSLRNLKVDLDLT
VEGDLSIIMAMAEKLKPGLHSFIFGKSFHTSVQERDVLMSL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctgcctgtccaccccaatctcctgcagtggccaagacagaaatcatgttggat
ggagactcgccattgctggctgctacttttgcttactgggacaatattcttggtccgaga
gtcagacacatttgggcgccgaaatgtgagcagttgctgctgagtgatggggaaataaca
tttttggccaaccacactttaaatggagagatcctgcggagtgccaaaagtggtgctatc
gatgtgaaattttttgtactctcagagaagggagtaatcataatctcattgatatttgat
ggtaacatgaatggggaccgcagtacttatgctctgtcagtgatactgcctcaaactgaa
ctgggtttctacctacctctgcacagattatgtgtagatcgactaacacacatcattaga
aaaggacgcatatggatgtacaagggccagagcattatttcttttttaactacagaaatc
acacccatcatggaattattttcatctatgaaaacacacggagtcccacaagaagttcaa
attaaggatactgttttgaatgatgatgacattggtgacagttgccacgaagattttctg
cataaggcgattagttcccatctgcagacatgtggatgttctgtggttgtcggaagcaat
ccattaaaagtaaacaagatggttcgtacgctgtgccttttcttgactccaacggaacgg
aagtgctcacgacttgctaatactagtggttctttcaaatataattcgggactctttgtt
cagggcctgttaaaggattctactggtagttttgtgctgccttatcgtcagattatgtat
gctccatacccaaccacgcacattgatgttgatgttaacacagtgatgcagatggcccca
tgccatgaacatatatataaccagcagaattatatgagtatggaacttgtcacacttcag
aagactgcatcagaagatgtcgaaattcctgataccttaattcatatggatgaaggtttt
acccctaatctgaatattttccaggatgtgatgaatcgagacacgttagtcaagtcgttt
ttagatcagatatttcagctcaagtctggtttgtccctcaggaacgttttcttggcacaa
tttcttcttgtacttcacagaaaagcccagacagtgataaaatacatagaagatgaaacc
cagaggggtaagaagcctttcaaatccttacgcaacctgaaagttgaccttgaccttaca
gtggaaggtgacttgagtattataatggccatggctgagaaattgaaaccaggcctccat
tcatttatcttcgggaaatctttccatacaagcgtacaagaacgcgatgtactaatgtca
ctttag
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