KEGG   Leucoraja erinacea (little skate): 129695578
Entry
129695578         CDS       T09122                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
leri  Leucoraja erinacea (little skate)
Pathway
leri00052  Galactose metabolism
leri00510  N-Glycan biosynthesis
leri00513  Various types of N-glycan biosynthesis
leri00514  Other types of O-glycan biosynthesis
leri00515  Mannose type O-glycan biosynthesis
leri00533  Glycosaminoglycan biosynthesis - keratan sulfate
leri00601  Glycosphingolipid biosynthesis - lacto and neolacto series
leri01100  Metabolic pathways
Module
leri_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
leri_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:leri00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    129695578
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    129695578
   00513 Various types of N-glycan biosynthesis
    129695578
   00515 Mannose type O-glycan biosynthesis
    129695578
   00514 Other types of O-glycan biosynthesis
    129695578
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    129695578
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    129695578
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:leri01003]
    129695578
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:leri04131]
    129695578
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:leri04147]
    129695578
Enzymes [BR:leri01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     129695578
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     129695578
    2.4.1.90  N-acetyllactosamine synthase
     129695578
Glycosyltransferases [BR:leri01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   129695578
Membrane trafficking [BR:leri04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    129695578
Exosome [BR:leri04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   129695578
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 129695578
NCBI-ProteinID: XP_055488632
LinkDB
Position
3:51418107..51464502
AA seq 355 aa
MRSCAPSRIFQVSCVALLALSALHLTVTLLYYLDIHVYTAQMVRRIGGLLVHQPTSSPAS
PNFTAAARNRTLPTASPLPIQPCPETPPRLVGPSRIEFSQSINLEDVRQNNLLVREGGRY
IPSECTALQKVAVIIPFRDRDEHLKYWLYYLHPILQRQQLDYGVYVINQHGEDTFNRAKL
LNVGFMEALKEDNYNCFVFSDVDLIPMDDRNIYKCYSQPRHLAVSMDKFSFRLPYNQFFG
GISALSREQHEKINGFPNNYWGWGGEDDDIYNRIIFRGMGISRPDGVIGKCRMIAHRRDK
KNEPNPQRFDRIARTRQTMQNDGLNSLKYKVLQMKKYPLYTFIDVDIGGPGRPPS
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgaggagctgtgcaccgagccgcatcttccaggtgtcgtgcgtggcgctgctggcgctc
agcgccctccacttgaccgtcaccctgctctactacctcgacatccacgtctacacggcg
cagatggtgcgccgcatcggcggcctcctggtacatcagcccaccagttctcccgcctcc
cccaacttcaccgcggccgcccgcaaccggacgctgcccaccgccagcccgctgccgata
caaccctgcccggagacaccgccgcgcctcgtgggcccctcaagaatagagttttctcag
tccattaatctggaagatgtgagacagaataatttgttagtgcgtgaaggaggccgatat
attccctcagaatgtacagctcttcagaaggttgcagtaatcattccttttcgtgaccgt
gatgagcatctgaaatattggttgtattatttgcatccaattctgcaacgacagcagctc
gattatggcgtgtatgtcattaaccagcatggtgaagatacttttaatcgagccaaactt
cttaacgtaggttttatggaagctttgaaggaagacaactacaattgctttgtattcagt
gatgttgatttgattcctatggatgatcgtaatatctacaagtgttacagccagccaagg
catctggctgtgtcaatggataaatttagtttccgcctgccatacaaccaattcttcggt
ggaatttcggccttaagtagagaacagcacgaaaaaatcaatggcttcccaaacaattat
tggggctggggaggggaagatgatgacatctacaacaggattatttttagaggtatggga
atatcacgtccagatggtgtcattgggaaatgccggatgatcgctcacaggagggataaa
aagaatgaacctaaccctcagaggtttgacagaattgcacgtacaaggcagacaatgcaa
aatgatggtttaaattcactcaaatataaagtactgcagatgaaaaaatacccattatac
accttcatcgatgtggatattggtgggcctggaaggccaccttcctga

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