Leucoraja erinaceus (little skate): 129696002
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Entry
129696002 CDS
T09122
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like
KO
K01116
phosphatidylinositol phospholipase C, gamma-1 [EC:
3.1.4.11
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00562
Inositol phosphate metabolism
leri01100
Metabolic pathways
leri04012
ErbB signaling pathway
leri04020
Calcium signaling pathway
leri04070
Phosphatidylinositol signaling system
leri04370
VEGF signaling pathway
Module
leri_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
129696002
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
129696002
04370 VEGF signaling pathway
129696002
04020 Calcium signaling pathway
129696002
04070 Phosphatidylinositol signaling system
129696002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129696002
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
129696002
Membrane trafficking [BR:
leri04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
129696002
Endocytosis
Macropinocytosis
Phospholipase C
129696002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_PLCG2
SH2
C2
PH
SH3_1
SH3_9
PH_12
EF-hand_PLCG1
SH3_2
EF-hand_like
SH2_1
GDPD
Csm1
Motif
Other DBs
NCBI-GeneID:
129696002
NCBI-ProteinID:
XP_055489397
LinkDB
All DBs
Position
4:complement(4332467..4462618)
Genome browser
AA seq
1218 aa
AA seq
DB search
MSVAAAAFSNGFLLDDWRVEAEMGRVSRSLELGSVMTLFHQKKSQRPERKTFQVRLETRQ
ITWSRTCEKTEGEIDIREIKEIRPGKNSRDFDRYPDEARKLDSGLCFVILYGMEFRLKTL
SLSAFNEDDINTWITGLNWLVHDVQKSPTPLHLERWLRKQYNTMDRNKENSVTVKELKAL
LPQVNYRVPNMRFLRDRLSELDTRMDMSCGHFGQFYRNLMFDAQKPIIEQLELSFPLRNV
ERPEHCQVTLFDFQKFLQYDQKESWASDTNKVRECIFNYLKDPLRETSDPVLQLDEFLAY
LFSKENMILDSRFDRVCPEEMNHPLSFYWISSSHNTYLTGDQFSSESSLEAYARCLRMGC
RCIELDCWDGPDDLPIIYHGHTLTSKIKFLDVLYTIKDHAFVTSEYPIILSIEDHCSVVQ
QRNMASYFKKVFGDMLLTKPVDINADELPSPNQLKKKILIKHKKLVEGNLYEEVTSGSYS
ENDISNSIKNGILYLEDPIDHNWSPHYFVLTSNKIYYSEETSRYHNNEDEEEEEHKEVGP
SEELTMEYCAWFLSRVTGTTDHSVSVCDVNLHLRLLTRLMTCCPTRWYHANLTRLQAEHM
LMRVPRDGAFLVRMRNEANSYAISFRAEGKIKHCRIQQEGRLFMLGSSAEFESLVDLVNY
YEKHSLYRKMKLRYPINEETLEKMGTTELDYGALYEMRTPHFYVEANKMPTVRCSVKALY
DYKAQREDELSFCKQALIHNVDKQEGGWWRGDYGGKKQLWFPANYVEETSNETAAVEPDG
RSVENSPLGSFLKGFIDVPTCYVVIQKDGKGSKQYVFTINSQQTCHPAQLLDVAADSQDD
LTDWVAKIREAAQNADARMQEGKIMERRKKIALELSELVVYCRPVPFDEEKIGTDKACYR
DMSSFPETKAEKYANKGKGKRFLQYNHRQLSRVYPRGQRLDSSNYDPLPMWLCGSQLVAL
NFQTPDKPMQLNQAIFSMNGRCGYVLHPDIMKEDTFDPFDKNTLKGVEPITIQLQILGAR
HLPKNGRSIVCPFVELEVCGAEYDNSKYKTEVVADNGLNPVWLFKQFVFDVNNPSFAFLK
FIVYDEDMFSDPNFLAQATYPVTGLKTGYRSVPLKNSYSEELDLASLLVHIEIVNAKEED
DENLYSSIQQLRDRTSELSSQVSSYQSSNSADSHYQQRLAELRVVQDQLQELTEARNKRL
IEKKKRDRLRQQVVSKRN
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccgcagccgccttctccaatggattcttgctggacgactggagggtggaa
gcagagatgggcagggtgagccgcagcctggagctgggctccgtcatgaccctgttccat
cagaagaagtctcagagacccgagaggaagacgttccaggttagactggagactcggcag
atcacctggagcaggacatgcgagaagacggagggcgagattgatatacgggaaattaaa
gaaattcgacctgggaagaactcgagggattttgatcgatacccagatgaggcgcggaaa
ctggacagcggtctgtgctttgtcattctctacgggatggagttcagactcaagacactc
agtctctcagcattcaatgaagatgacatcaacacgtggataacaggattgaactggttg
gtgcacgacgtgcagaaatctcctacacctctccacttggaacggtggctcaggaaacag
tacaacacaatggacaggaacaaagagaacagcgtcacggtaaaggagttgaaggcgttg
ctgccgcaggtcaactacagagtgcccaacatgaggttcctcagagacagactgtcggag
ctggacacgaggatggacatgagctgcggacactttggccaattctaccggaacctgatg
tttgatgcacagaagccgataattgaacagctggagctgtcgtttcctctcaggaatgtg
gagaggccagaacactgccaagtgacgctctttgacttccagaagtttctgcagtatgat
cagaaggaaagttgggcaagtgacactaacaaagtgcgtgaatgcatctttaattacttg
aaagaccctctgcgggagacatcagacccagtgcttcaactggatgagttcctggcgtat
ctgttctccaaagagaacatgattttggactctcgctttgaccgtgtgtgccctgaagag
atgaatcaccctctctccttctactggatctcctcctcacacaacacgtacctgactggg
gaccagttttccagtgagtcgtcgctagaagcctacgctcgatgcctgaggatgggatgc
cgctgcatagaactggactgctgggatggaccagatgacctgcccatcatttatcacgga
cacacactaacctccaaaatcaagttcctggacgttctctacaccatcaaggaccatgcc
ttcgtcacctcagagtaccccataatcctctccattgaggaccactgcagcgttgtacag
cagaggaacatggcttcctacttcaagaaggtgtttggagacatgttgctgaccaaaccc
gtggacattaatgctgatgaactcccatcccccaatcagctgaagaagaagattctgatc
aagcacaagaagctggtggagggtaacctgtatgaagaggtgacgtcaggcagctactct
gagaatgacatcagcaactccatcaagaacggcatcctgtacctagaggaccccattgac
cacaattggagtcctcattattttgtcctgacgagtaataagatctactactctgaggaa
acatccaggtaccataacaatgaggatgaagaagaagaggaacacaaggaggtaggtccc
agtgaagaactcactatggagtattgtgcctggttcctgtcacgagtgaccggaactaca
gatcactctgtgtctgtctgcgatgtaaacctgcatctgcggttactaacacgcctaatg
acatgttgtcccaccaggtggtatcacgctaacctcacgcggctccaggcagaacacatg
ttgatgcgtgtgccacgggatggggcgttcctggtgcgcatgaggaacgaggccaactcc
tacgccatctccttccgggcagagggcaagatcaaacactgccgtatccagcaggagggt
cgcctcttcatgctgggcagctcggccgagtttgagagcctggtcgacctggtcaactac
tacgagaagcactcgctgtatcgcaagatgaagcttcgctaccccatcaacgaggagacg
ctggagaagatgggaaccacggagctggactatggagccttgtacgagatgaggacacca
cacttctacgtagaagccaataagatgccaacagtaaggtgctcggtgaaggccttgtac
gactacaaggcccagcgggaggatgagctgtccttctgcaagcaggccctgatccacaac
gtggacaagcaggaggggggctggtggagaggggattatgggggcaagaagcagctgtgg
ttcccggccaattacgtggaggagaccagcaacgagacggcagcggtggagcccgacggg
aggtcggtggagaacagtccactgggaagtttcctcaaagggtttattgatgttccgacg
tgctacgtggtgatacagaaggatggcaaggggagcaagcagtacgtgttcaccatcaac
tcccagcagacgtgtcaccccgcgcagctgctcgacgtggcagccgacagtcaggacgac
ctgaccgactgggtggccaagatccgtgaagcagcgcagaacgcagacgccaggatgcag
gaagggaagatcatggagagacggaagaagattgcactggagctgtcggagcttgtggtt
tattgccgtcccgtgcccttcgatgaagagaagatcggcacggacaaggcgtgttaccgg
gacatgtcatcgttcccggagaccaaggctgagaaatacgccaacaagggcaaaggcaag
aggttcctgcagtacaaccaccggcagctgagtcgggtttacccgcgcgggcagcggctc
gactcctccaactacgacccactgcccatgtggctgtgtggcagtcagctggtggccctc
aacttccagacgccagacaagccgatgcaactgaaccaggcgatcttcagcatgaacggc
cgttgtggctacgtgctgcaccccgacatcatgaaggaggacaccttcgaccccttcgac
aagaacaccctgaaaggcgtggagcccatcaccatccagctacagatcctgggtgctcgg
cacctgcccaagaacggaaggagcatcgtctgcccgtttgtggagctggaggtttgcgga
gcggagtacgacaacagcaagtacaagacagaggtggtggctgacaacggtctcaacccc
gtctggctcttcaagcagtttgtctttgatgtcaacaaccccagctttgccttcctgaag
ttcattgtgtacgatgaggacatgttcagtgaccccaacttcctggcgcaggccacctac
cccgtgaccgggctgaaaacaggatacagatcggtgccactgaagaacagttacagcgag
gagctggatttggcatccctgctggttcacatcgagatagtcaatgccaaggaggaggat
gatgagaacctgtactcatccatccagcaactgcgggaccggaccagcgagctgagcagc
caagtgtccagctaccagagcagcaacagcgctgactcccactaccagcagcggctggcc
gagctgcgggtggttcaagaccagctccaggagctaacggaggctcgcaacaaacgcctg
atcgagaagaagaagcgggatcgactccggcagcaggtggtgagcaagaggaactga
DBGET
integrated database retrieval system
