Leucoraja erinacea (little skate): 129698345
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Entry
129698345 CDS
T09122
Symbol
smpd1
Name
(RefSeq) LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri00600
Sphingolipid metabolism
leri01100
Metabolic pathways
leri04142
Lysosome
leri04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
129698345 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129698345 (smpd1)
09143 Cell growth and death
04217 Necroptosis
129698345 (smpd1)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
129698345 (smpd1)
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Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
129698345
NCBI-ProteinID:
XP_055493413
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Position
6:complement(82238239..82259199)
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AA seq
580 aa
AA seq
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MAARPLLALLCAALWALSPGPHRLAAAPAPLHPFTPVRGLNISCRACRASFTALDFALQL
KVGMDEVGLMATRLCVELHLAAGEVCVQAIRLFERDMITAWVESVLRPAEACGLLLGSDC
GHWDIYGPWNISLPVTPKPPVVPPVLPPAGSPVTRILFLTDIHWDKDYAAGTDPHCREPL
CCRVGAGRPPSHRQGAGPWGEYSNCDLPLRTITNLLQHLQHQRYDLAYWAGDIPAHNVWQ
QSRHDQINALTTITKLLRQHLPNLTIYPAVGNHESTPVNSFPPPFIHGNQSSSWLYNAMV
DAWQQWLPPTALETLRRGGFYTVAVRPGLRLVSLNMNFCSHENFWLLINSTDPAGQLQWL
VEVLQGAEWSGEKVHIIGHIPPGLCMKVWSWNYYRIVNRYEGTIAAQFFGHTHVDEFEMF
YDEETLSRPLSVAFIAPSVTTYIGLNPGYRVYEVDGDYRGSSGLVLDHETFILNLTEANG
SGRAAWSSLYRLRQSYGMATAFPADFQRLLSRLYKDQRLFDRYWYLRHKGSAALPCLTEC
RAAVLCALRTGRADDPQLCRDLPPDLPYSQLHRHRPPPMC
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggccgctcctcgccctcctgtgcgctgctctgtgggccctcagccccggc
ccccaccgcctggccgccgctcccgccccgctgcacccgttcaccccggtccgcggcctc
aacatcagctgccgggcctgtagagcgtccttcaccgcgctggacttcgcgctgcagctg
aaggtgggcatggatgaggtgggtctgatggccacgcgcctgtgtgtggagctgcacctt
gctgcaggggaggtctgcgtgcaggccattcggctgtttgagcgtgacatgatcactgcg
tgggtggagtcagtgctgcggcctgcagaggcatgcgggctgctgctgggcagcgactgt
gggcactgggacatctacggtccatggaacatcagcctgccggtgacaccaaagcccccg
gtggtgccgccggtgttgccgccggccggctcgcccgttacccgcatcctcttcctgact
gacattcactgggacaaggactacgctgccggcacagatccccattgccgggagcccctg
tgttgccgtgtcggtgctggccggccgccctctcaccggcagggcgccggcccctggggc
gagtacagcaactgcgacttgccgctgcgcaccatcacaaacctcctgcagcatctgcag
caccagcgctacgacctggcgtactgggccggcgatatccctgcccacaacgtgtggcaa
cagagccggcacgaccaaatcaatgccctgaccaccatcaccaaactcctgcgccaacac
ctgcccaacctcaccatctatcctgccgtgggcaaccacgagagcaccccagtcaacagc
ttccccccccccttcatccacggaaaccagtccagctcctggctctacaacgccatggtg
gatgcctggcagcaatggctgccccccacagccctggagaccctgcggaggggagggttc
tacacggtggcggtacgaccaggcctcaggcttgtctcactcaacatgaacttctgctcg
cacgagaacttctggctgctcatcaactccaccgaccccgctggtcagctgcagtggctg
gtggaagtcctgcagggggcagagtggagcggggagaaggttcacatcatcgggcacatc
ccccccggtctctgcatgaaggtctggagctggaactattaccgcatcgtcaacaggtat
gaggggacgatagcagcccagttttttggccacacacacgtggatgagtttgagatgttc
tacgatgaggagacgctgagccgcccgctgtctgtggccttcatcgcccccagcgtcacc
acctacatcggcctcaacccggggtaccgtgtgtacgaggttgacggtgattaccggggc
agctccggcctggtgcttgaccacgagacattcatcctgaacctgacggaggccaatggc
agtggccgtgccgcctggagctccctgtaccggctacggcagagttacggcatggccacc
gccttccccgctgacttccagcggctgctgagccgcctgtacaaggaccagcgcctcttc
gaccgttactggtacctgcggcacaaggggagtgctgcactgccgtgcctcaccgagtgc
cgggctgccgtgctctgtgccctgcgtaccggccgtgccgacgacccccagctgtgccgg
gacctgccccctgacctgccctactcccaactccaccggcatcggcccccccccatgtgc
tga
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