Leucoraja erinaceus (little skate): 129698350
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Entry
129698350 CDS
T09122
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129698350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129698350
04121 Ubiquitin system [BR:
leri04121
]
129698350
Membrane trafficking [BR:
leri04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
129698350
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129698350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
WDR55
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
F-box-like
Beta-prop_Nup120_160
HHH_3
ANAPC4_WD40
ASA1
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_SPT8
F-box
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_RIG_1st
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
CFAP251_N
TRM82_WD
PQQ_2
Beta-prop_VPS8
Beta-prop_IFT140_1st
T2SSK
HHH
WD40_RFWD3
Beta-prop_IFT140_2nd
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
129698350
NCBI-ProteinID:
XP_055493421
LinkDB
All DBs
Position
6:82303391..82428560
Genome browser
AA seq
697 aa
AA seq
DB search
MESPEKVDVNRASAEELATALFGIGRKRARAIVRRREELKGFSSLDDLLDIKGITCHFLE
RNGNLLSCQANQVSTAKSMEGLSSSSSSSFSDGGAVDEESGVHGDWEEGENEDIDEREDD
LSDTAEGIEDHCGESYYYFVADLVQETQGRGLVQRVKPKMKRKSENGLDVRSLSPGKKLC
KGSEYTSSLSPCINTTTTFGDIRNGNIPGQHRRRITSVTPPTDLQEWLGMFQRWSGPEKL
LALDELIDRCETSQIKYMMQVIEPQFQRDFISLLPKELALYVLSFLEPRDLLRAAQTCRY
WRILAEDNLLWREKCREEIVSEPLYLRRRRMLSTGFMYSPWKSAFMRQHKIDTNWRSGEI
KPPKVLKGHDDHVITCLQFSGNRILSGSDDNTLKVWSAITGECVQTLVGHTGGVWSSQMR
GSIAISGSTDRTLKVWNAETGECIHTRYGHASTVRCMHLHGNKVVSGSRDATLRVWDIDT
GRCLHTLLGHVAAVRCVQYDGERVVSGAYDYTVKVWDPLTETCVHTLQGHTNRVYSLQYD
GVHIVSGSLDTSIRVWDAENGNCLHTLMGHQSLTSGMELKDNILVSGNADATVKIWDIKT
GQCLQTLQGPNKHQSAVTCLQFIQKFVVTSSDDGTVKLWDLKTGDFIRNLVALESGGSGG
VVWRLRASKTKLICAVGSRNGTEETKLLVLDFDVDMK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcccgagaaggtggacgtgaaccgggcgagcgccgaggagttggccaccgcg
ctgttcggcatcggcaggaagcgagcgagagccatcgtgaggcggagagaggagttaaaa
ggtttctcttcgctggatgatcttctggacatcaaaggcatcacctgccacttcctggag
aggaacggtaacctgctgtcttgccaagcgaatcaagtcagcacagccaagagtatggaa
ggcctgtcaagcagctccagcagtagcttctcggatggaggtgcagtggatgaggagagt
ggagttcatggagactgggaggagggagagaatgaagatatcgatgagagagaagatgac
ctaagcgacacagcagagggcattgaggaccattgcggagagtcgtattattattttgtt
gccgacctcgttcaggagacacagggtagaggcctggtccagcgcgtcaagcccaagatg
aagcgaaaatccgagaatggccttgacgtgcgatcattgtcaccaggaaagaaattgtgc
aaaggctcagaatacaccagttccctgtcgccctgcataaatacaaccaccacgtttggg
gacatcaggaatggcaacatcccaggtcagcaccgccgacgtataacttcagtcacgcct
cccacagatctacaggaatggcttggcatgttccagaggtggagtggccccgagaagttg
ctggctctggatgaactcattgaccgatgtgagacgtcgcagatcaagtacatgatgcag
gtcatcgagccacagttccagcgagacttcatctccctgctgcctaaagagctggcgctc
tacgtgctgtccttcctggagcccagggacctgctgcgagcagcgcagacctgtcggtac
tggcgcatcttggctgaggacaacctgctgtggagagagaaatgcagagaagaaattgtg
agtgagccgctgtacctgcgcaggcgacgcatgctcagcaccggcttcatgtacagtccc
tggaaatcggcattcatgaggcagcataagatagacaccaactggcgatcgggcgagatc
aaacctcccaaggtgttgaaaggtcacgatgatcacgtcatcacctgcctacagttctct
ggcaatcgcatcctcagcggctctgatgacaacacgctcaaagtctggtctgccatcact
ggagagtgtgtgcagacgctggtgggacacacagggggcgtttggtcgtcacagatgaga
ggcagcatcgccatcagcggctccaccgaccgcaccctgaaggtgtggaacgcagagacg
ggcgagtgtatccacacgcggtacgggcacgcctccactgtacgctgcatgcacctccac
ggcaacaaggtggtgagtggatcgagggacgccactctcagagtgtgggacattgacacg
ggccgctgcctgcacactctcctgggccacgtggcagcagtgcggtgcgtgcagtacgat
ggtgagagggtggtgagcggggcctacgactacactgtcaaggtgtgggacccactgact
gagacctgcgtgcacacactccagggccacacaaacagagtctactcacttcagtatgac
ggtgtacacatcgtgagcgggtcgctggacacgtctatccgggtgtgggacgctgagaac
ggtaactgcctgcacactctgatgggccatcagtcactgaccagcggcatggagctgaag
gacaacatcctggtgtcaggcaatgccgacgccaccgtcaaaatctgggacatcaagacc
ggacaatgtctgcagaccctgcaagggccaaacaagcaccagagtgctgtcacctgcctg
cagttcatccagaagtttgtggtcactagctcggacgatgggacggtcaaactgtgggac
cttaaaacgggcgacttcattcgcaacctggtggccctggagagtggtggcagcggtggg
gtggtgtggaggctgcgtgcatcaaagaccaagctgatctgtgcggtgggcagtcgcaat
ggtacagaggagaccaagctgttggtgctggactttgatgtggatatgaagtga
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