Leucoraja erinaceus (little skate): 129699700
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Entry
129699700 CDS
T09122
Name
(RefSeq) TNF receptor-associated factor 5-like isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04217
Necroptosis
leri04621
NOD-like receptor signaling pathway
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129699700
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129699700
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129699700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129699700
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129699700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-TRAF_2
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
ATG16
zf-RING_6
Exo84_C
DUF7201
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
129699700
NCBI-ProteinID:
XP_055495678
LinkDB
All DBs
Position
8:52423160..52469477
Genome browser
AA seq
575 aa
AA seq
DB search
MAKPDGLFSNRTLMASKEIPDVKSNFFIRQDSANTSLSLGFDPYHAGFNLQFVEPLEDRY
KCVICSFVLCNPYQTGCGHRFCENCIAELRETKPIAMCPIDHEGIISNWIFKDNCCKREV
WNLMVYCKNAPDCNTKVSFGRLGDHLKKCQFETVECINGCNAVLQRKYLIDHLQAVCEFR
EEACQYCKVTLIFKNIKDHEVITCPKYPVYCTNNCGASFMRSEIDAHLTICPEAEVECSY
KKYGCHAREKRKKMKEHEQSCLNEHLLLVVTNNNKLEAQILDLQKTLCERNHIITQMEEQ
INKLDIMVAHLSEAISKNDDEVAKTQKILAGHADKIITIEQHSQQLCRRLDQERNNEITS
LKEVIIALKEKVETAENNIVSMVSFKPCLKQHELLLNTHKKLLEKTNERFRVLEAAGYNG
KLIWKICNYRRRKQEAAEGAAVSLFSQPFYTSRCGYRLCARAYLNGDGAGKGTHLSLFFV
VMKGEYDSLLMWPFKQKVTLALLDQSQKKHHIVELFKADASSTSFKRPISEMNIASGCPR
FVSHAVLEVGKMGTYIKDDTLFIKVIVDLTDLEDQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacctgacggtttattcagcaacagaacactgatggcctccaaagaaatccct
gatgttaaatcaaacttcttcattcgccaagatagtgccaacacatcactgtctttaggg
tttgacccgtatcacgctggattcaatcttcaatttgttgagccattggaagatcggtac
aagtgtgtgatttgttcttttgttctatgtaatccgtaccagactggatgtggacatcga
ttttgtgaaaattgcattgcagaattaagagagacaaaaccaattgccatgtgtcctatt
gatcacgaaggaattatttcaaattggatatttaaagataactgctgcaagagggaagtg
tggaatttgatggtgtattgtaaaaatgcaccagattgcaacacaaaagtatcctttggg
cgtttaggggatcaccttaaaaaatgtcaatttgaaactgtagaatgcatcaacggttgc
aacgctgtcttgcaaaggaaatatttaatcgatcatttgcaagcagtgtgtgaatttaga
gaagaggcttgccaatattgcaaagtgactttaatctttaaaaatattaaggatcatgaa
gtcatcacatgtccgaagtatcctgtttattgcacaaacaattgtggtgcaagttttatg
agaagtgagattgatgcacatctgactatctgtccagaagctgaagtggaatgtagctac
aaaaaatatggttgccatgccagggagaaacggaagaagatgaaggaacatgaacaatct
tgtttaaatgaacatttattgcttgttgttacaaacaataataaattggaagcacagata
ttggatctgcaaaaaacattatgtgaaagaaaccacattatcactcagatggaagaacaa
ataaacaagcttgacatcatggttgcacatttgagtgaggccatttctaaaaacgatgat
gaggttgcaaagacacagaaaatcctggccgggcatgctgacaaaataataaccattgag
caacattcacaacaactttgcagaagattagatcaagaaagaaataatgaaataacatca
ctgaaggaagtaattattgcattgaaggaaaaggtggaaactgctgaaaacaacattgtg
tcaatggtttcttttaagccatgtctgaagcaacacgaattattgttaaatacccataag
aaactactagaaaagactaatgagagatttcgagtcttggaagcagctggatacaatggc
aaactgatatggaagatctgcaactacagaaggagaaaacaggaggcagcggagggagct
gctgtttctctttttagccaacccttttacacaagtcggtgtggatacaggctctgtgct
agggcatatttaaatggagacggtgcaggcaaaggaacacatttatctttgttttttgtt
gttatgaaaggcgaatatgactctctgttgatgtggccatttaaacagaaggtcactctt
gcattgcttgaccagagccaaaaaaaacatcacattgtagaactctttaaggccgatgcc
agcagcaccagtttcaaaagaccaatttcagaaatgaatatcgcatctggatgtccacga
tttgtgtcccatgcagttctcgaagttgggaaaatggggacatatataaaagatgacaca
ttgttcatcaaagtcatcgtggacttaactgatcttgaagatcaatag
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