Leucoraja erinaceus (little skate): 129699983
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Entry
129699983 CDS
T09122
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129699983 (bcl11ba)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129699983 (bcl11ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
DUF3268
Zn_SUZ12
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
129699983
NCBI-ProteinID:
XP_055496073
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All DBs
Position
9:complement(9221178..9406907)
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AA seq
800 aa
AA seq
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MSRRKQGNPQHLSKREFSQANHVEMASTDEEDAAAMVGLGSGDRDLLTCGQCQAHFPLAD
ILVFIEHKRRQCNATAVCFDKALDKRSPSPPHTEPRRVSEPVEIGIQVTPEEDDRLLTPT
KGICPKQEHLAGGKDEPSSYICTTCKQPFMSAWFLLQHAQNTHGFRIYLETHPSNSPLTP
RIGLPPSLGPDPISQSPLTTFLGENNPFNLLRMTGPILQEHPGFGDGRLPNTPPIFSPPP
RHHLDPHRLDRLSADEMGLVSQHHSAFDRVMRLNHPLGIESQTMDFSRRLRELAGNNSST
PPLSPSRHNPMHRLLQPFQPSPKSPFLSTPPLPPMPPSSTTPPQSQAKTKSCEFCGKTFK
FQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHVHKMAGRSDDGLSATSSPEP
GTSEHAGGEGCGLKAGGGGSGFMNENEEEEEEEEEEEEEELENESRPESSFSMDSELSRN
RENGFKLPVNDKQQQHCVLGKVMENVGLRAIQHYGDVQKRAIFSKRSSDGQRDTGDEDSV
AGEMERPGEEGAVNGRGFGPPPEAFPMLLPRKPPLIASPSPSSIASAKRIKMEKDLDLSS
ATPLIPSENVYSQWLVGYAASRHFMKDPFLGFGDSRQSPFGTSSEHSSENGSLRFSTPPG
DMLDGGLSGRSGTASSGSTPHMGSGSCPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVH
RRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQIGKEVYRCDICQMPFSVYSTLEKHMK
KWHGEHLLTSDVKIEQAERS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgcaagcaagggaaccctcagcatttaagtaaaagggaattttcgcaggct
aaccatgtggagatggcgagtacagacgaggaggatgcggcggccatggtgggtctgggc
agcggagaccgtgacctgctcacctgcgggcagtgccaggcccacttcccactggccgat
atcctggtcttcatcgagcacaagaggaggcagtgcaacgccacggccgtctgcttcgac
aaggcactggataaacgtagcccatcgccccctcacacagagccccggagggtgtccgaa
cccgtcgagattggcatccaggtcacccctgaggaagatgaccgtctgctaacgcctacg
aaaggaatttgccccaagcaggaacaccttgctggaggcaaagacgagccttcaagctac
atttgcacaacttgcaagcagcctttcatgagcgcctggttcctgctccaacacgcacag
aacacgcacggattccgcatttacttggagacccacccgtccaacagccccctaactcca
cggattggccttcctccatcgctgggcccagaccccatctcgcagtcgcctctcaccacc
ttcctgggcgagaacaaccctttcaacctgctgcggatgacggggcccatcctccaggag
cacccgggcttcggcgacggacgcctgcccaacactccccccatcttcagcccgccccct
cggcatcacctagaccctcatcgcttggaccgccttagtgccgacgaaatgggcttggta
tcccagcatcacagtgccttcgacagagtaatgcgtttaaaccacccgctgggcatcgag
tctcagaccatggacttctccaggaggctccgggaactggcagggaacaacagttccacg
ccgcccctgtcgcccagccgccacaaccctatgcaccgcctgctccagcccttccagccc
agccccaagtcgcccttcctgagcacccccccgctgccgcccatgccacccagcagcacc
accccgccgcagtctcaagccaagaccaagtcgtgcgagttctgcggcaagaccttcaag
ttccagagcaacctgatcgtccacaggcgaagccacactggcgagaagccctacaagtgc
cagctgtgcgaccacgcctgctcgcaggccagcaagctgaagcgccacatgaagacccac
gtgcacaagatggcgggcaggtcggacgacggcttgtccgccaccagctcgccggagccg
ggcaccagcgagcacgccggcggcgagggctgcggcctcaaggcaggcggcggcggctcc
ggcttcatgaacgagaacgaagaggaggaggaggaggaggaggaagaggaggaggaagag
ctggagaacgagagccggcccgagtcgagcttcagcatggactcggagctgagccgcaac
cgggagaatggcttcaagctgccggtcaacgacaagcagcagcagcactgcgtgctgggc
aaggtgatggagaacgtgggcctccgcgccatccagcactacggcgacgtgcagaagcgc
gccatcttctccaagcgctcgtccgacggccagagggacacgggcgacgaagactcggtg
gccggcgagatggagaggcccggcgaggagggcgcggtcaacggacgaggcttcgggccg
ccccccgaggccttccccatgctgctgccccggaagcctccgctcatcgccagcccctcc
ccttcctccatcgcctcggccaagaggatcaagatggagaaagacctggacctgtcctcc
gccacgcccttgatcccctcagagaacgtttactcgcagtggctggtgggctacgcggcc
tcccggcacttcatgaaagatcctttcctgggtttcggcgactccaggcagtcgcccttc
ggcacctcgtcggagcattcgtcggagaacggcagcctgaggttctccactccgcccggt
gacatgctggacggcggcctgtcggggagaagcgggacggcgagcagcggcagcaccccc
cacatggggtcgggatcgtgcccgggccccgggcggccgagctcgaaggaaggccgacgg
agcgacacctgcgagtactgcggcaaagtgttcaaaaactgcagcaacttgacagtgcac
cgccggagccacacgggcgagaggccttacaagtgcgagctctgcaactatgcctgcgcc
cagagcagcaagctgacccgccacatgaaaacgcacggccagatcggcaaggaggtttac
aggtgcgacatttgtcaaatgcccttcagcgtttacagcaccctcgagaaacacatgaaa
aagtggcacggagaacacttgttgacgagtgacgttaaaatcgaacaagcagaaagaagc
taa
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