KEGG   Leucoraja erinacea (little skate): 129700569
Entry
129700569         CDS       T09122                                 
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
leri  Leucoraja erinacea (little skate)
Pathway
leri04620  Toll-like receptor signaling pathway
leri04621  NOD-like receptor signaling pathway
leri04622  RIG-I-like receptor signaling pathway
leri05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:leri00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    129700569 (traf3)
   04621 NOD-like receptor signaling pathway
    129700569 (traf3)
   04622 RIG-I-like receptor signaling pathway
    129700569 (traf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129700569 (traf3)
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF TRAF3_RING zf-TRAF_2 Sina_ZnF zf-C3HC4 zf-C3HC4_2 zf-rbx1 zf-C3HC4_4 Fez1 CHASE7 RRN9 Exonuc_VII_L DUF5798 zf-RING_UBOX
Other DBs
NCBI-GeneID: 129700569
NCBI-ProteinID: XP_055497157
LinkDB
Position
9:69986674..70071472
AA seq 577 aa
MATARTVESVAPPLSLESLVQQVNLVHVQAQDSKLGIEPEDGGFTQRFVLTVESKYKCEH
CRLPLCNPKQTECGHRFCGSCILKILRGPKPVCPLDNVALYENMVFKDICCKKEVLALQI
YCRNELNGCTKQLPLGKLEAHLLECPYQEVCCPRRGCTEQIQRKDLADHLNSSCTYREQV
CKYCKKNVTIAELKIHEDIDCPAFPVLCPNKCNKFILRGELSRHQLECLNQVMSCPFSQY
GCSFQGNKQELKVHEGNAMAQHLNCALKKNEHLEKMVFELQNKLQEKCNTVDLMAAQLSH
LEKEQSKSAQLANKNESRLGHMQKMLASQTDKLMTIDQTSQQAYQRQEETARDAKTLRES
VDHLQTRVRQLELPGRAAGSGSGATSFTELSNQLKRFDSLLSVHDVRLADMDLRFQLLET
VSYNGKLIWKIRDYKRRKQEAVNGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHL
SLFFVVMRGEYDALLPWPFKQKVTLMLLDQGQASRHLGDAFKPDPNSSSFKQPVGEMNIA
SGCPLFVAQTVLESGTYIKDDTIFIKVVVDTSDMPDP
NT seq 1734 nt   +upstreamnt  +downstreamnt
atggcgacggcgaggaccgtagaatcagtggcgcccccactctccctggagtcgctggtg
cagcaggtcaacctggtccacgtgcaggcccaggacagcaagctcggcatcgagcccgag
gatgggggcttcacccagcgtttcgtcctcactgtggaaagcaagtacaagtgcgaacac
tgccgtctcccgctctgcaaccccaagcaaaccgagtgtggccaccgcttctgtggcagc
tgcatactgaaaatcctcaggggtccaaaaccagtttgcccacttgataatgtggcttta
tatgagaatatggtttttaaggacatctgctgtaaaaaagaggttttggcacttcaaatc
tactgtagaaatgaactaaatggctgcaccaaacagctacctctagggaagcttgaggct
cacttacttgaatgtccttatcaggaagtttgctgccctcgcaggggctgtacagaacaa
attcagcggaaagatttagctgaccatttaaattccagctgtacatatcgcgagcaagtc
tgtaaatattgcaaaaaaaacgtcaccattgcagaattaaagatacatgaagacattgac
tgtccagcatttcctgtcctttgcccaaacaaatgcaataagtttatcctgagaggcgaa
ttatctcgccaccagttagaatgtctcaaccaggtcatgtcctgtccattctctcagtat
ggttgtagtttccaggggaacaagcaggagcttaaagtgcacgagggaaacgcaatggcc
caacatttaaattgtgcgctcaagaagaacgaacatctggaaaaaatggttttcgagctg
cagaacaagctgcaagaaaagtgtaacacggtggatttgatggctgctcagctaagccat
ctggagaaggaacaaagtaaatctgcacagcttgccaacaagaacgaaagtcgccttggc
cacatgcagaaaatgttagcgagtcagacggataagttgatgaccattgatcaaacctcg
cagcaggcttaccagaggcaggaggagacggctcgagatgccaaaactctgcgcgagtct
gtagaccacctacagacgcgggttagacaactggaactgcccggcagagctgctggttcg
ggctctggggccaccagcttcacggagttaagtaaccagctgaagaggtttgacagtttg
ctgagcgtgcatgacgtaaggttggccgacatggacctgcgcttccaactcttggagacg
gtcagctacaacggcaaactgatttggaagatccgtgactacaagcggcggaaacaggag
gcggtgaatggcaagaccttgtccctgtacagccagcccttctacaccggctattttggc
tacaagatgtgtgcccgcgtgtatctcaacggagacggcatgggtaaaggaacccacttg
tccctgttctttgttgtcatgcgaggggaatacgatgcactcttaccctggcccttcaag
cagaaggtgaccttgatgttgctggaccaaggccaggccagtcggcacctgggtgatgcc
tttaaacccgaccccaacagcagcagcttcaagcagccggtgggagagatgaacatcgcc
tcgggctgcccactctttgttgcacagacggttttggaaagtggaacgtacattaaggat
gacactatcttcattaaagtcgtcgtggatacttcggacatgcctgacccgtga

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