Leucoraja erinacea (little skate): 129700569
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Entry
129700569 CDS
T09122
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04620
Toll-like receptor signaling pathway
leri04621
NOD-like receptor signaling pathway
leri04622
RIG-I-like receptor signaling pathway
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129700569 (traf3)
04621 NOD-like receptor signaling pathway
129700569 (traf3)
04622 RIG-I-like receptor signaling pathway
129700569 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129700569 (traf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-TRAF_2
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_4
Fez1
CHASE7
RRN9
Exonuc_VII_L
DUF5798
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
129700569
NCBI-ProteinID:
XP_055497157
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All DBs
Position
9:69986674..70071472
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AA seq
577 aa
AA seq
DB search
MATARTVESVAPPLSLESLVQQVNLVHVQAQDSKLGIEPEDGGFTQRFVLTVESKYKCEH
CRLPLCNPKQTECGHRFCGSCILKILRGPKPVCPLDNVALYENMVFKDICCKKEVLALQI
YCRNELNGCTKQLPLGKLEAHLLECPYQEVCCPRRGCTEQIQRKDLADHLNSSCTYREQV
CKYCKKNVTIAELKIHEDIDCPAFPVLCPNKCNKFILRGELSRHQLECLNQVMSCPFSQY
GCSFQGNKQELKVHEGNAMAQHLNCALKKNEHLEKMVFELQNKLQEKCNTVDLMAAQLSH
LEKEQSKSAQLANKNESRLGHMQKMLASQTDKLMTIDQTSQQAYQRQEETARDAKTLRES
VDHLQTRVRQLELPGRAAGSGSGATSFTELSNQLKRFDSLLSVHDVRLADMDLRFQLLET
VSYNGKLIWKIRDYKRRKQEAVNGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHL
SLFFVVMRGEYDALLPWPFKQKVTLMLLDQGQASRHLGDAFKPDPNSSSFKQPVGEMNIA
SGCPLFVAQTVLESGTYIKDDTIFIKVVVDTSDMPDP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgaggaccgtagaatcagtggcgcccccactctccctggagtcgctggtg
cagcaggtcaacctggtccacgtgcaggcccaggacagcaagctcggcatcgagcccgag
gatgggggcttcacccagcgtttcgtcctcactgtggaaagcaagtacaagtgcgaacac
tgccgtctcccgctctgcaaccccaagcaaaccgagtgtggccaccgcttctgtggcagc
tgcatactgaaaatcctcaggggtccaaaaccagtttgcccacttgataatgtggcttta
tatgagaatatggtttttaaggacatctgctgtaaaaaagaggttttggcacttcaaatc
tactgtagaaatgaactaaatggctgcaccaaacagctacctctagggaagcttgaggct
cacttacttgaatgtccttatcaggaagtttgctgccctcgcaggggctgtacagaacaa
attcagcggaaagatttagctgaccatttaaattccagctgtacatatcgcgagcaagtc
tgtaaatattgcaaaaaaaacgtcaccattgcagaattaaagatacatgaagacattgac
tgtccagcatttcctgtcctttgcccaaacaaatgcaataagtttatcctgagaggcgaa
ttatctcgccaccagttagaatgtctcaaccaggtcatgtcctgtccattctctcagtat
ggttgtagtttccaggggaacaagcaggagcttaaagtgcacgagggaaacgcaatggcc
caacatttaaattgtgcgctcaagaagaacgaacatctggaaaaaatggttttcgagctg
cagaacaagctgcaagaaaagtgtaacacggtggatttgatggctgctcagctaagccat
ctggagaaggaacaaagtaaatctgcacagcttgccaacaagaacgaaagtcgccttggc
cacatgcagaaaatgttagcgagtcagacggataagttgatgaccattgatcaaacctcg
cagcaggcttaccagaggcaggaggagacggctcgagatgccaaaactctgcgcgagtct
gtagaccacctacagacgcgggttagacaactggaactgcccggcagagctgctggttcg
ggctctggggccaccagcttcacggagttaagtaaccagctgaagaggtttgacagtttg
ctgagcgtgcatgacgtaaggttggccgacatggacctgcgcttccaactcttggagacg
gtcagctacaacggcaaactgatttggaagatccgtgactacaagcggcggaaacaggag
gcggtgaatggcaagaccttgtccctgtacagccagcccttctacaccggctattttggc
tacaagatgtgtgcccgcgtgtatctcaacggagacggcatgggtaaaggaacccacttg
tccctgttctttgttgtcatgcgaggggaatacgatgcactcttaccctggcccttcaag
cagaaggtgaccttgatgttgctggaccaaggccaggccagtcggcacctgggtgatgcc
tttaaacccgaccccaacagcagcagcttcaagcagccggtgggagagatgaacatcgcc
tcgggctgcccactctttgttgcacagacggttttggaaagtggaacgtacattaaggat
gacactatcttcattaaagtcgtcgtggatacttcggacatgcctgacccgtga
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