Leucoraja erinacea (little skate): 129701139
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Entry
129701139 CDS
T09122
Symbol
prg4b
Name
(RefSeq) proteoglycan 4b isoform X1
KO
K10159
toll-like receptor 2
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04145
Phagosome
leri04620
Toll-like receptor signaling pathway
leri05132
Salmonella infection
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129701139 (prg4b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129701139 (prg4b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129701139 (prg4b)
09171 Infectious disease: bacterial
05132 Salmonella infection
129701139 (prg4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129701139 (prg4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129701139 (prg4b)
04054 Pattern recognition receptors [BR:
leri04054
]
129701139 (prg4b)
04090 CD molecules [BR:
leri04090
]
129701139 (prg4b)
00536 Glycosaminoglycan binding proteins [BR:
leri00536
]
129701139 (prg4b)
Membrane trafficking [BR:
leri04131
]
Endocytosis
Phagocytosis
Toll-like receptors
129701139 (prg4b)
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of breast milk
129701139 (prg4b)
Pattern recognition receptors [BR:
leri04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
129701139 (prg4b)
CD molecules [BR:
leri04090
]
Proteins
129701139 (prg4b)
Glycosaminoglycan binding proteins [BR:
leri00536
]
Hyaluronan
Cell surface receptors
129701139 (prg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
129701139
NCBI-ProteinID:
XP_055498133
LinkDB
All DBs
Position
10:complement(47742151..47880459)
Genome browser
AA seq
802 aa
AA seq
DB search
MAQMTLLGTIVVLTYLSSPAACVSSDGLGTHSMNCSRIGYPLSPCIVGPDIEKLDLSHNN
IKIIQQQNFQNLTKLKILFLQFNEIAKIEPGSFAKNSELLHLDLSNNLLHVISDLPFNHL
RSLTYLDITHNRFETADFGAEISKLQKLHTLRFGNVLLSSLNSSYLFSLQAVPIKEMYFI
PGELKTYEPGTLNILQSMEKLSLDLQFGLQPQLLINIFKDIPISTTTLEILNTDLVKYGE
NEDLFFPLKKSNISTLVIMNITVDDSMTTYLLNTVLDSNIKELYLIGVRMDGIGRWNIQA
VPVENINLRKLSIIDLHNPNFYKFYSLQHLLNIFRHLTELRIMKGSLFYVPCEVSEIMTE
VRYMDLSSNLLQGPTFVPEECSDPFPKLNTLVLNRNTVADLHTLSRLTNKLKSLSNISAS
HNDLRLAKKQSCTWLQTLKRMDLSHNSLAENVFDCLPASVESLDLSYNSITTVPNLRRLE
NLREIILTKNSIVSFPEIAGLKTLHIDNNGMTHVNVDSLQSMGLTELKLSNNPFECSCAI
QSLTNYIQQTDTKILDWPHQYQCYSPPRFRNQVIKYLKFSPIECKIPLFVGILVACIAAL
VAVCILLCIKYNITWYIRTLWLWLKAKRNLDVSQVQNNFEFNAFISYSEHDALWVKNKLL
AQLENNEPPYRICIHERDFKPGKPIITNIIDCISKSYKTIFILSKNFVKSEWCHYEFFFA
HQQVFDDKKDSLILLLLEPIPKNSIPDRFCKLRKLMNKNTYLEWPQNEFQQGFFWKRLKA
VLNLDFHPCSSTSVHKKGQLDP
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatgactctgttggggacaattgtcgtgttaacttatctttcctcacctgct
gcttgtgtatcatcagatgggttagggacacattcaatgaattgttcaagaattggatat
ccactttctccttgtatcgtggggccagacatagagaagttggatctgtcccacaacaac
atcaaaataattcaacagcagaacttccaaaatctgaccaagctgaaaattctgtttcta
caattcaatgagatcgccaaaatagaacctggatcatttgcaaaaaactcagaactactt
catcttgatctttcaaataatttgctgcatgttatttcagacttgccatttaaccatctg
cgatcattaacataccttgatattacccacaacaggtttgaaacggctgactttggagca
gagatcagcaagctgcagaaactacacactttacgttttggaaatgttttgctctcttcc
ctgaattccagttacttattttcccttcaggcagtcccaattaaagagatgtattttata
cctggagaattgaagacatatgaacctggaacgctcaatatcctgcaaagcatggagaaa
ctttctttagatttacagtttgggctgcaaccacaattattgattaatatttttaaggat
attccaatatcgactaccacattggagattctaaatactgatttggtcaaatatggtgaa
aatgaagatctattctttcctttaaaaaaatcaaatatctcaacattagttattatgaat
attaccgttgatgattctatgactacttatctccttaacactgttctggactcaaacata
aaagaattatatttaatcggtgttagaatggatggcattggcagatggaatatacaggct
gtgccggtggaaaatattaatttgcgtaaactttctataattgacttgcataatccaaat
ttctacaaattttattcacttcaacatttacttaatatatttagacatctgactgagtta
agaataatgaaggggagcttgttctacgtcccatgtgaggtatctgaaatcatgactgaa
gtaagatatatggatttatcttccaacttacttcagggacctacctttgttcctgaagaa
tgttcagatccttttcccaaacttaacactctcgttctgaacaggaacacagttgcagat
ctacatacactaagtagattgacaaataaattgaaaagcttgtccaatataagtgcgagt
cataatgatctacgcttggccaagaaacagtcttgcacatggcttcaaacactgaaacgt
atggatttatctcacaattccctagcagaaaatgtgtttgactgcttgccggcatcagtg
gaatctctagacttgagttacaattccattaccactgtgccaaacctgagaagactggaa
aacctccgggaaattattttgacaaaaaattccattgtctcttttcctgagattgcagga
ctgaaaactttgcatattgacaacaatggaatgacccatgtcaacgtggactcattacag
tccatgggtctgacggagctcaaactgagcaataatccctttgaatgttcctgtgcaatt
caatcactcaccaattatattcaacagacagatacaaagattctcgattggccgcatcag
tatcagtgttacagtccaccaagatttaggaatcaagttatcaaatatctgaaattttct
cccatcgagtgcaaaatccccttatttgtagggattcttgtggcatgtatagcagcatta
gtggcagtgtgtatcctgctgtgtataaaatataacattacctggtacatacgcacactc
tggctttggctcaaggctaaaagaaatctagatgtcagccaggttcagaacaattttgag
ttcaatgcttttatttcatacagtgaacatgatgccttgtgggtgaagaacaaattgtta
gcacagctagagaacaatgagcccccatatcgcatctgcatccatgaaagagatttcaaa
cctggaaagccaatcattactaatatcattgactgcatatcaaaaagctacaaaaccatt
ttcatcttatcaaaaaactttgtgaaaagtgaatggtgccactatgaatttttctttgcc
caccaacaggtatttgatgataaaaaggacagtctcatcctgctcctgttagaacctatt
ccaaagaattctatccccgatcgattttgcaaattgaggaagctgatgaacaagaacaca
tacctggagtggcctcagaatgagtttcaacagggcttcttttggaaaagattgaaagct
gtcctgaatttggatttccatccatgcagttctacaagtgtgcataaaaaggggcaatta
gatccatga
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integrated database retrieval system
