Leucoraja erinaceus (little skate): 129702043
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Entry
129702043 CDS
T09122
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
leri04210
Apoptosis
leri04217
Necroptosis
leri04510
Focal adhesion
leri04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129702043
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129702043
04217 Necroptosis
129702043
09144 Cellular community - eukaryotes
04510 Focal adhesion
129702043
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129702043
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129702043
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129702043
03029 Mitochondrial biogenesis [BR:
leri03029
]
129702043
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129702043
Peptidases and inhibitors [BR:
leri01002
]
Peptidase inhibitors
Family I32: IAP family
129702043
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129702043
Mitochondrial biogenesis [BR:
leri03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
129702043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
UBA_BIRC2-3
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
129702043
NCBI-ProteinID:
XP_055499531
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All DBs
Position
12:8749706..8790380
Genome browser
AA seq
491 aa
AA seq
DB search
MDIVTDCKQNLSNEIYRLETFENFPSAVPVSDRTLARAGFFYTGYKDQVKCFSCGGTIEN
WQHGDSAVRKHRQLFPACPFINGLRLNEQVSNSSCSVESRGENQSSSINGPSRHPNGNHQ
FPGDLVRSGGIEDMSHLRPRNPTMCSEAARLKTFTNWPSYGIVTPRDLAKAGLYYIGKDD
HVQCFCCGGLMKNWEPGDRAMSEHKRHFPGCSFVSDLSVGNVPIDLNCGTTDIHQHVKDE
PRASPFHLPKHPEKQSFDSRLQTFRNQMQFPLNAEDLAGAGFYNTGDGDNVKCFHCDGGL
RNWERGDKAWEQHAKWFPGCDFLLQQKGQDFINDVHLKKINVHSTNRALPQDGLSPHSES
AFSESSLMQSPAVLGALEMGFDKMLIMQLVKKKIEVARDTYKSVDSLVGDLLAPEVKPQD
QEHYGQKEATNVEEQLKKLKEEKACKICWDRDVCIVFLPCGHIATCKECSSVKTCPICCS
KILERVRIYMA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgtaacagattgcaaacagaatctctcgaatgagatttaccgacttgaaaca
tttgaaaactttccatcagctgttccagtgagtgacaggacattagccagagcgggcttt
ttctacaccggctacaaggaccaggttaaatgtttcagctgtggtgggacaatagaaaac
tggcaacatggcgattctgctgtgaggaaacacaggcagcttttcccagcttgtccgttc
attaacggcctgcggttaaacgaacaagtgtcaaactccagttgttcagtcgagtctcgg
ggtgaaaatcaaagttcttccataaacggcccctccagacatcccaacggcaaccaccag
tttcccggcgatctcgtgagaagtggaggcattgaagacatgtcccacctgcggccgaga
aatcccaccatgtgcagtgaggcggccagactgaagaccttcaccaactggcccagttat
ggcattgtaaccccaagagacttggccaaagcgggactatactacattggcaaagacgac
catgttcagtgcttttgttgcggtggcttaatgaaaaattgggaaccaggggatcgtgcc
atgtctgagcacaagaggcattttcccggctgctcttttgtttctgacctctcggttgga
aatgtaccaattgatttgaattgtggcaccacggacattcaccagcacgttaaagatgag
ccaagagcgagcccctttcatctccccaaacacccagagaaacagtcctttgattctcgg
cttcaaacgttccgaaaccaaatgcagttcccgcttaatgctgaagatcttgcaggagct
ggattttacaacacaggtgacggtgacaacgtgaaatgttttcactgcgatggaggcctt
agaaattgggaacgtggtgacaaggcctgggagcagcatgcaaaatggtttccagggtgt
gatttcctgcttcaacagaagggccaagactttattaatgatgttcacttgaagaaaatc
aatgtgcattccacgaatcgagctctgccacaagatggtctttctcctcattccgaatcc
gctttttcagaaagctcattgatgcagagtcccgccgttttgggtgctcttgagatggga
tttgacaagatgctgataatgcaactggtgaaaaagaaaattgaagtggcgcgtgatacg
tacaagtctgtggattccctggttggagatcttctggctcccgaggtaaaaccacaagat
caggaacactatgggcagaaagaagcgacaaatgttgaagaacaactgaaaaaactgaag
gaagagaaggcctgtaaaatttgctgggatcgagatgtttgcattgtctttctgccttgt
ggccatatagccacgtgcaaagaatgttcctctgtaaagacttgcccaatttgttgttcc
aaaattctggagcgagttagaatatacatggcttaa
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