Leucoraja erinaceus (little skate): 129702828
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Entry
129702828 CDS
T09122
Symbol
rb1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04110
Cell cycle
leri04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129702828 (rb1)
04218 Cellular senescence
129702828 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
leri01009
]
129702828 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129702828 (rb1)
Protein phosphatases and associated proteins [BR:
leri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129702828 (rb1)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
129702828 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
129702828
NCBI-ProteinID:
XP_055500819
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All DBs
Position
13:33041870..33224326
Genome browser
AA seq
915 aa
AA seq
DB search
MHPKHSKKVAVSDSEESSSPTRHKNAEFILLCQSLKVEENVNERAWKIWESMPTHLVNGI
ALENRKYWGICIFIAAVDLNAVSFTLTELQKTLDLNVTEFLQLLKKMDVNLDTVSTEVNL
LVLRLVKKLHVFTALFEKFKRICEKIFEETPCNQAPSDANKPVMKVCWITFLLATGKLLQ
MEDDLVLSFQLLLCVLEYFIKILPAELIKEPYRAAANSIISSGLSRASRRSHNRTTQASN
LTEVDSKVLEILCQENECNTDEVKNIYLKSFLPFLDKIKISSCTEFPELDTLSRQYEELY
HHNKDFDGRLFLECDKTLQMDPEDRCEERTPKMPQTEDGNTVHPPQTPVRYKLFCVHSLL
GTLHSSVEYXAQRCSTFFQNCTINPTTNITKRVENLGQKFQEKFARAVGEGWAEIGSQRY
NLGVRLYYRVMESMLKSEEKRLSVQNFSKLLNDATFHGSLLTCAVEVVMTTYGMTWNVSL
KSSIQTETDLSFPWILRVFNIKAYEFYKVIESFIKAEPNLTREMIKHVERCEHRIMESIA
WQSDSPLFDILKQQKERDDQPDQLEPTSTLKQPLQHSHTAADLYLSPVRSPWKKGSGTAN
TVPTQQTKTETSSSWQSQSQLQQKSQKSTSLSLFYKKVYRLAYLRLNMLCNHLHLPSEHP
QLEAIIWTLFQHTLANEHELMKDRHLDQIMMCSMYAICKVKNIDLRFKTIVTAYKDLPNT
NQETFKHVLIKEGQYDSIIGFYNLVFIQRLKTNILQYVSTRPPTLSPIPHVPRSSFGFPT
SPLRVPGGNNIYVSPLKSSYKTDGLLSPTKMTPRTRILVSIGEPFGTPEKFQKINQLVSS
SDRHLKRAGDTGSVPKPLKRLRFDMDEQDEADGSKHLSGESKLLQQKIAEMTSTRNKIQE
QKMKDGSSDTKRDEN
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccaagcactcgaagaaagtcgccgtgtctgactctgaagaaagcagctctcct
accagacacaaaaatgcagagtttatcttattatgtcaaagccttaaggttgaagaaaat
gtgaacgagagagcttggaagatatgggagtcgatgccaacacatttggttaatggtatt
gcactagaaaataggaagtattgggggatttgcatttttatcgcagcagtagatttgaat
gctgtttccttcactctgacggaattgcagaaaaccttggatctgaacgtaacagagttt
ttgcagctactgaaaaaaatggatgtgaacttggacactgttagcactgaagtaaattta
ttggtgctgagactggtaaagaagctccatgtcttcactgctctctttgaaaaatttaag
aggatatgtgaaaagatatttgaagagacaccatgtaaccaggcaccatcggatgctaat
aaaccagtgatgaaagtctgttggatcacatttcttctagcaacaggaaagctactacag
atggaagatgaccttgtgctctctttccaattgttgctttgtgtcctggagtactttatt
aagatcttgcctgctgaattgattaaggaaccttacagagctgctgcgaatagtataatt
tccagtggtttatcaagagcttctagacggagtcacaacagaacaacacaagcaagcaat
ttaactgaggtggactccaaagtcttggaaattctttgtcaggaaaatgaatgcaataca
gatgaagtgaaaaacatttatttgaaaagctttcttccttttctggacaaaattaaaata
tcttcctgtactgaatttcctgagcttgatacactttcaagacaatatgaggagctttat
catcacaacaaagatttcgatggaagactatttcttgagtgtgacaaaactctgcagatg
gacccagaagacagatgcgaagaaagaactccaaagatgcctcaaactgaagatggtaat
acagtacatcctccgcagactcctgttaggtacaaattgttttgtgttcattcgcttcta
ggtaccttacattcctctgttgaatattaggcgcagcgttgttctactttttttcagaat
tgtacaataaaccccaccaccaacattactaaaagagtggagaatttgggtcaaaagttt
caggagaaatttgctcgggctgtgggagaaggatgggctgagattggatcacagagatat
aatcttggtgtacggttgtactatagagttatggaatccatgttgaaatcggaagaaaag
cgtctttctgtccaaaattttagcaagttgttgaatgatgctacttttcatggatccctt
ctaacctgtgccgtggaagttgttatgaccacatatggtatgacctggaatgtttcattg
aagagcagcattcaaacagaaactgacctttcctttccctggatccttcgcgtattcaac
ataaaggcttatgagttttataaagttatcgagagcttcattaaagcagaaccaaatcta
acccgagagatgattaagcacgtggaaagatgtgaacacaggatcatggagtctattgct
tggcagtcggactcacctttgtttgacatactcaagcaacaaaaagaacgggatgatcag
ccagatcagcttgaacccaccagtaccctcaaacaaccactccagcacagccacactgct
gcagatctttatctttctcctgtgcgatcaccatggaagaaaggatctggtacagcaaac
acagttcccacacaacaaacaaaaactgagacatcatcatcttggcaatcccagtcccaa
cttcaacagaagtctcagaaatctacctcactctctctcttctacaagaaagtgtatcgt
ctggcatatcttcgactgaacatgctatgcaatcatcttcatctaccgtctgaacatcct
cagctggaagctattatatggacgttgtttcagcacacattagcaaatgaacatgaactt
atgaaagacagacatttagaccagataatgatgtgttccatgtatgccatttgcaaggtg
aagaacatagaccttagattcaagactattgttactgcctataaggacttgccaaataca
aatcaagagaccttcaaacatgtactgattaaagaagggcagtatgattccatcataggc
ttctacaacctggtattcatacagaggctaaaaaccaatattttacagtatgtttcaacc
cgtccgccaacactctccccaatacctcatgttcctcgaagttcatttggttttccaacc
tctccactacgtgtacctggtgggaacaacatttatgtctctccactgaagagttcgtat
aaaactgacggattgctgtcccccacaaaaatgaccccaagaacacgaatcttggtgtct
attggtgaaccatttgggacaccagaaaaattccagaaaatcaaccagctggtcagttcc
agcgatcgacacttgaagcgggctggggacactggaagtgtgccaaagccactgaaaagg
cttcgctttgatatggatgaacaggatgaggctgacggcagcaaacacttgtctggggaa
tccaaactactacagcagaagattgctgaaatgacatccacaagaaataagatacaagaa
cagaaaatgaaggatgggagcagcgacacaaagagggatgaaaactga
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