Leucoraja erinaceus (little skate): 129702995
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Entry
129702995 CDS
T09122
Symbol
ttc3
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129702995 (ttc3)
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129702995 (ttc3)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129702995 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
TPR_1
zf-RING_2
TPR_2
TPR_BSK1_C
zf-rbx1
TPR_16
TPR_11
TPR_12
zf-C3HC4_2
zf-C3HC4
CARD
zf-RING_5
TPR_19
zf-C3HC4_3
zf-RING_UBOX
TPR_17
ANAPC3
TPR_9
zf-RING-like
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
129702995
NCBI-ProteinID:
XP_055501106
LinkDB
All DBs
Position
13:46819463..46896156
Genome browser
AA seq
1899 aa
AA seq
DB search
MNQKKNMETAEIWCSDIETIHERYNQRWHIIKMHILWPYLFVQKKDHDRYLQWAIAAKFI
DPENYDIFELNMIKLKNIELLEEVLHALKKRNHSITFLERLLDLLDKVDAINCDLDEAIA
MIEKTEEINALQMEVKSGTRRSRMAAIAIGCFQYAYFLKLFMCPENLPHIVPNIDAESFL
ESKDCRERGNKEFKKENYEAAVNLYSRAIDLSPDNEILYGNRAFCFFRIENYKKALGDGK
RAIILCPAWTKGHYRFCDALFSMGEHKHAIEANAKAQELCRSDPNGIRDLIQQKSKFVRL
QDENAEKLKTDTIKKELSTKKEQTQLATQPVNECHKNESTRPLSEGHKTESKRNQERNVL
KRHQSPRPKMTSTPLNSSDNLMDKLTSLIQDGHVALSEQRARNAERAFFQVLKFVNPEKL
EEVSLSTMDYVIIIYGHASALLGIGQPEELTEAENQFNKILERFPEQRLDCLAFYGLGKA
YFQQNRFIDALDPFTKSLLMINRKIVPGILTWPTTAVVIEETQNEKLKALLEEYIERCQF
PPQPDAICRYQHCQGHSKAQIYFSDPDFKGFIQVVCILQCRLEYHINCWKKLKATSFEDK
NDKEFLNGPCFTPDCEGKFSELVIYDSKGLVKCEFVTKIMKNKGSLKTVVKQKCSSAVKL
KIKEDRKQTRKLRKASLYNAEKQSKENVEKNIKTEETNSKTGHSWNPFGDQMLQLIIKNK
EKLISGSWNVSTLLQELLSLHVLSKEDCDMLSTDASKPCQVMDQLLDLIVQKNNRVKTRV
FLFTLTKCQEVDNKLLDWINWLNDSGREAAGLFMLRYSKFIEQLDLDSLLNLLKASEIDL
TMYNSTKEIVEQLKQESPTKARSFIWMLEEKREQFPSLHNPLDEYFNAMDAPCTVLKKQE
IEELSNSGLKSKIRNRKKKLKDSKTVILLPGMLGSGTREEDDDEVNSDDSNLVPMNSADG
FTVPSYLYQQMEEFEDMYDDISIGSRYQQLLDNSSDPTCENLYDYFAQILNEHGPLEVDD
SLLVGEFENFPPEAQDVVRMAGGLKSFLMGSLRFVMNKGVIGLAKHAVQLENLTGNDKAA
TRSTKISQTNSDEISIESLRPVAPLNPAAKEFMPLSHGHSYILTSNINSLYEPQNQEYLH
YNSELGGNISTDDGYMHNPMIYNSAITSEHNLKTRDPMNEHYLSASECSPVFDPSFCGDP
SSDTVTDTSQVIPVFPIQQLNLPVTNSNNQLHSLNGGSDPVMNEIENMKLPSCGKNAAAV
GTLEVPRASFVTESSKGASNKLGSVKYNNNNNNKKHENKQCSLLRTIAVQVDRESLCNTK
SNTDPFQPFENQQGDILRIEKEHNVLQQQLQEAEEKYDQLTKRSKNEITTLEERMSQFTQ
KNELLKSELNSVRHVLQSEIKKSLHEKRENNETLKKLKLKVRSLAELNQMYTQNIQEKEQ
LYKDCTKEFEEISDQSSRENKKVEEAIKKNVDVYNATSKRAIEAEVAVLEELQKTQLVSH
YRAADKTKCNLEKLRALNINTSAIPQLRMSISAWEYLLFEIQRTIHQTEECFKDQITRVK
AGMHLSSLAPVTVPSLPMPPPVMLEMSTIDDPAIIASFPRAATPLLELQMQKHNLLLPQG
STILTENSTPSITRATIEKTKFPSSFQDQHSSNHFQSGAAWTKPRSTWSPTSSRSDSPVG
PILASSAESQPSTNQSAHAKSQQCNSFDKIIFRLLAMFPDYTHASLTNFIKEVRSANGGS
LSGLVYDEIINQVADHILDHQDRKKVQFPSANFQQATILADQRSAFVPSDVPKTNSVNRK
SRLPDGLSQPWRPVNVHTAPQWQGSGNIIFDGEPCIICHDDLTPDGMCALQCGHHFHEVC
IKQWLKANSTCPTCRVHALLPEDFPMLPGILTPLNLPFS
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaaaaaagaatatggaaacggctgagatttggtgttctgatattgaaactatt
catgaacgctataaccagcgttggcatataataaagatgcacatcttatggccctattta
tttgttcagaagaaagaccatgatcgctatctacagtgggctattgcagccaaattcata
gatccagagaattatgacatctttgaattaaatatgataaagctaaaaaatattgagctc
ctagaagaagtgcttcacgcactaaagaaacgcaatcactctataacatttctggagcgt
ttattggacttgttggataaagtagatgcgattaattgtgaccttgatgaggccattgct
atgatagaaaagacggaagaaattaatgccttgcaaatggaggtgaaatctggaacaaga
cgttccagaatggcagctattgcaattgggtgttttcaatatgcatattttcttaagctg
tttatgtgtcctgaaaatcttcctcatatagtaccaaacatagatgccgagtcatttctg
gaaagcaaagactgcagagagagaggaaacaaggaatttaaaaaggagaactatgaagct
gctgtgaacttgtactccagggcaattgatttaagtcctgacaatgaaatactgtatgga
aacagagcgttctgcttttttcgtattgaaaattacaaaaaagctcttggtgatggaaaa
agagccataatcttgtgcccagcttggacgaagggtcattatcgcttttgtgatgccttg
ttttcgatgggagaacataagcatgctattgaagctaatgccaaggctcaagaattatgc
aggagcgatccaaatggaattcgggatttaattcagcagaaatcaaaattcgttagactg
caggatgaaaatgctgagaaactaaagactgatacaataaagaaagaattaagcaccaaa
aaagagcaaacccaattagccactcaacctgtaaatgaatgtcataagaatgagtccact
cggccactgagtgaaggtcataagactgagtccaagaggaaccaggaaagaaatgtttta
aagcgtcatcagtcaccacggccaaagatgacgtcaacgcctttaaacagctcagataat
ttaatggacaaattgacatctctgattcaagatggacatgtagccttatcggaacagcga
gcccgcaatgctgaacgtgccttctttcaggtcctgaagttcgtgaatccagaaaagctt
gaggaagtatctttgtccaccatggactatgtgataataatctatggtcatgcctctgcc
ctccttggcattggacagcctgaggagttgactgaggctgaaaatcaatttaataaaatc
ttggagcggtttccagaacaaaggcttgattgtttggcattctatggacttggcaaagca
tactttcagcagaacagatttatcgatgctttagatccattcactaaatccttacttatg
ataaaccgtaagattgtacctggcatactaacatggcccacaacagctgttgttatcgaa
gaaacacaaaatgaaaagttaaaggcattattggaagaatacatagagaggtgtcaattc
cctccacaacctgatgcaatctgccgctatcaacattgccaaggccattctaaggcccag
atttatttctcagacccagattttaagggttttattcaagtagtatgcatcctacagtgc
cgtttagagtaccatatcaattgctggaaaaaattgaaggccacatcatttgaagataaa
aatgacaaggaatttctcaatggcccatgtttcactccagattgtgaagggaaattttct
gaacttgtaatatatgattcaaaaggtcttgtgaaatgtgagtttgtgactaaaataatg
aaaaacaaaggatctttgaaaacagttgttaaacagaaatgctcaagtgctgtgaagtta
aagattaaagaagatcgtaaacaaacaagaaaattaagaaaagcatcactatacaatgcc
gaaaagcaaagtaaagaaaatgttgaaaagaatattaaaactgaagaaaccaattctaaa
actggtcattcctggaatccttttggtgatcaaatgttgcagttgataattaaaaacaaa
gaaaagttaatatctggaagttggaatgtttcaactctacttcaagaactgctatctttg
catgttctaagcaaagaggactgcgatatgctatctactgatgcctccaagccatgtcaa
gttatggatcaactgcttgacctcattgtgcagaagaataacagagtaaagacaagggtg
ttccttttcacgcttacaaaatgccaagaagttgacaacaaactgttagattggattaac
tggctaaatgattcgggccgtgaagcagcaggattgttcatgcttcgttattccaaattc
atagagcaactggacctggactctttactaaacctactcaaagcatctgaaattgatcta
acaatgtataatagcacaaaggaaattgtcgaacaattgaaacaggaatcgcccacaaaa
gcccgcagctttatctggatgttggaggagaaaagagagcaattcccttccctgcataat
cctttggatgaatattttaatgcaatggatgctccttgtaccgtattgaagaagcaagaa
attgaagaattatctaattctggccttaaaagtaaaatccgaaacagaaaaaaaaagtta
aaagattccaagactgtgatccttctacctgggatgcttggaagtgggactcgtgaagag
gatgatgatgaagtaaactcagatgatagcaacctggtgccaatgaattctgcagatggt
tttacagtaccaagctatctttatcagcaaatggaggaatttgaagatatgtacgatgat
atttcaattggtagtcgttaccagcaacttctcgacaatagctcggacccaacttgtgaa
aatttatatgattactttgcccaaattctgaatgaacatggtccactggaagttgatgac
tcactattggtaggcgagtttgaaaacttcccaccagaggctcaggatgtggtgcgaatg
gcaggtggtttgaaatcatttcttatgggctcgttgcgatttgtgatgaacaaaggtgtg
attggactcgcgaagcacgcagtacaattggagaatttgactggaaatgataaagcagca
accagaagcacaaaaatatcacagaccaactcagatgaaatttctattgaaagcttgcga
ccagtggctcctctcaatcctgctgctaaagaattcatgccattatctcatggtcattca
tatatattgacatcaaatataaattcattatatgaaccacaaaatcaagagtatttacat
tataatagtgaactgggaggtaatatttcaacggatgatgggtatatgcataatccaatg
atttataactcagccatcacatcagaacataatttgaagactagagatccaatgaacgaa
cattacttaagtgcttctgaatgctcaccagttttcgatccatcattctgtggcgatcca
tcatccgatactgtgactgacacatcacaagtaatcccggttttccccatacaacaatta
aacctacctgttactaattcaaataatcagcttcattctcttaatggagggagtgatcct
gtaatgaatgaaatagaaaatatgaagcttccgtcttgtggtaaaaatgcagcagccgta
ggcacacttgaggtacctcgtgccagttttgtgacagaaagttcgaagggagcatcaaac
aagctgggcagtgtaaaatacaataataataataataataaaaagcatgaaaataaacaa
tgctcattactgaggaccattgccgtacaggttgatcgggaatctttatgtaacaccaaa
agcaatactgatccttttcaaccatttgaaaatcaacagggtgatattttgaggattgag
aaagagcataatgttctccagcaacaattacaagaagcagaagaaaaatatgatcagctt
acaaagcgcagcaagaatgaaattactactcttgaagaaaggatgtctcaattcacacaa
aaaaatgagcttctaaaatctgagctcaactcagttcgtcacgtcttgcaaagtgaaatt
aagaagagtctacatgaaaagcgagaaaataatgaaaccttaaaaaaactcaaactcaaa
gttagatctcttgctgagctgaatcaaatgtacactcaaaatatacaggagaaagaacag
ctttataaagattgcaccaaagaatttgaggaaataagtgaccagtcatcaagagaaaat
aaaaaggtagaagaagccattaagaagaatgttgatgtatacaacgcaactagtaaaaga
gccattgaagcggaggtggctgtgctggaagagctgcagaaaacacagttggtttcccat
tacagagcagctgataagacaaaatgtaatttggagaaactgagagcattgaatatcaac
acatcagctattccacaactacgcatgtcaatttctgcctgggaatatttattgtttgaa
attcaacgtacaatccatcaaactgaggaatgttttaaagatcagattactcgggtgaaa
gctggaatgcacttaagcagcctggcaccagtgactgtaccaagcctcccaatgccacca
cctgtgatgctggaaatgtcaactattgatgatcctgccattattgcatctttccctcgt
gctgcaactccgctcctggagttacaaatgcaaaaacataatttactactgccacaaggc
tcaactattctaacggagaattccacgccgtcaatcacaagagccactatagaaaagaca
aagtttccatccagctttcaggaccagcattcctcaaaccattttcaatctggtgctgct
tggaccaagcctcggtctacctggtcaccaacaagtagtcgatcagactcacctgtggga
ccgatactcgcaagctctgctgaatcgcagccttctacaaatcaatctgcacatgcaaaa
tctcagcaatgcaatagctttgataagataatcttccgtcttttagccatgttccctgat
tatacacatgccagcctgacgaacttcattaaagaagttcgtagtgcaaatggtggttcc
ctttctggattagtgtacgatgagataatcaatcaagtggcagatcacatcctggatcat
caggacagaaaaaaggtccagtttccgtctgccaactttcaacaggcaacaatcctggct
gaccaaagatccgcttttgtcccaagtgatgtcccaaaaactaactcggtgaacagaaag
tccagactacccgatggtctttcccaaccttggcgaccagtcaatgttcacactgctcca
cagtggcagggaagcggtaacataatatttgacggcgagccgtgtattatttgtcatgat
gatttaacgccagacggcatgtgtgcgttgcaatgcgggcatcacttccacgaggtgtgc
atcaagcaatggctgaaagcaaatagcacctgtccaacatgtcgagtccatgctctcctg
cctgaggacttccccatgctgcctggaatattaactccactaaacttacctttctcataa
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integrated database retrieval system
