Leucoraja erinaceus (little skate): 129704200
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Entry
129704200 CDS
T09122
Name
(RefSeq) short transient receptor potential channel 3-like isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129704200
Ion channels [BR:
leri04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129704200
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
129704200
NCBI-ProteinID:
XP_055503129
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Position
1:complement(162009726..162113153)
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AA seq
928 aa
AA seq
DB search
MSEEGKRSQVQTTVSFHEEETRRDWKEENGDLGSHYHNPVAEDKRLYGLPQTMQGVNNPS
VMQRRMTVLREKGRRQAVRGPTFMFNDRGTSLTPEEERFLDAAEYGNIPVVRRMLEEDKS
LNVNCVDYMGQNALQLAVGNEHLEVTELLLKRDNLARIGDALLLAISKGYIRIVEAILNH
SGFEPSNRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGA
RIEKPHDYFCKCNDCVEKQKHDAFNHSRSRINAYKGLASPAYLSLSSEDPVHTALELSNE
LAKLANIEKEFKLKNKKIELAKGPHKVTSSNDYRRLSMQCKDFVVGVLDLCRDSEEVEAI
LNGDVDAEQDNGHHCQRAGLTRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTI
TMKCLVVLIISIGLPFLAIGYWIAPCSKLGKILRSPFMKFVMHAASFIIFLCLLVFNASD
RFEGIKTLPNVTVLDYPEQVFRMKTTMFTWTEMLIMVWILGMMWAECKEIWTEGPLEYIC
QMWNLLDFGMLSIFIAAFTARFLAFLEASKAQQFVDGRVKDNNLSLVPLPPEVEYYTYAR
DRWVPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIM
VFLAFMIGMFILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENI
GYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWMFYFDHGKTLPPP
FSLMPTPKSCISLIVRIKNCLLGLFKCRRKRLKKDVEIGMMNSKSRLNLFAQSNLRISET
QSFNSIINQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDK
SQATEELAFLIQKLGEKLNTCLAKQKHE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaggtaaaagaagccaggttcagacaactgtgtcctttcatgaagaagaa
actcgacgagactggaaggaggagaacggagatctgggctcgcattatcacaacccagta
gctgaggacaaacgtctatatggattgccccaaaccatgcaaggtgtcaataacccatcg
gtgatgcagcggagaatgacggtgctcagggagaaaggaaggagacaggctgtccgcgga
ccaacgttcatgttcaatgacagaggaacaagtttaacgccagaagaggaacgatttttg
gatgcagctgaatatgggaacatacctgttgtccggagaatgctggaggaggacaagtcg
ctcaatgtcaattgtgttgattacatgggtcaaaatgccctccaactcgcagttggaaat
gaacatttggaagtaacagagcttcttctgaagagggataacttggctcgcatcggagat
gcattgttacttgctatcagtaagggttacatacgaatagtggaagcaattttgaatcac
tctggatttgagcccagtaaccgtctgacccttagcccatgtgaacaagaattgcaggat
gatgatttttatgcctacgatgaagacggcaccagattttccccagacatcaccccaatc
atactggccgctcactgccagaaatatgaagtggtgcacatgttgctcatgaagggggca
cggattgagaaaccccatgattatttctgtaaatgtaatgattgtgtggagaagcaaaag
catgatgcgtttaaccactccagatcccggatcaatgcatataaaggattagcaagccct
gcctatctgtccttgtccagtgaggatccagtacatactgcactggagctgagtaatgaa
ctggccaagttggcaaacattgaaaaagaatttaagcttaaaaacaagaaaattgaattg
gcaaaaggcccacacaaggtgacatcatcgaatgactaccgcaggctatctatgcaatgc
aaagactttgtcgttggtgttcttgacctgtgccgagacagtgaggaggttgaagctatt
ttgaatggtgatgttgacgctgaacaagataacggacaccactgtcaaagagcaggtttg
acccgcgtcaaactcgccattaaatatgaagtcaaaaagtttgtagcccacccaaattgc
cagcagcaactgcttacaatatggtatgaaaacctctcaggattacgggagcaaaccatc
acaatgaaatgccttgtggtgctcattatttcaattggacttccatttcttgcaattggc
tattggattgcaccatgtagcaagctggggaagattctaagaagtcccttcatgaagttt
gtgatgcatgcagcatccttcatcatctttctgtgtttactagtatttaatgcctctgac
agatttgaaggcatcaaaacattacccaatgtcaccgttttggattaccctgaacaagtc
ttcagaatgaaaaccaccatgttcacttggacggaaatgctgattatggtgtggatacta
ggcatgatgtgggctgaatgtaaggaaatctggacggaaggaccactggagtacatttgc
caaatgtggaatcttttagattttggaatgttatccattttcatcgctgcattcacagca
agatttctggcttttctagaagcctcaaaagcacagcaatttgttgatggacgtgttaag
gataataacctttcacttgtgccacttccaccagaagtggagtactacacgtatgccaga
gatagatgggttccctccgatcctcagatcatttctgaaggcctctatgcaatagctgtt
gtccttagtttttcacggattgcttatatcctgcctgcaaatgaaagctttggcccatta
caaatttcccttggaaggactgtgaaagatatattcaagtttatggtcatttttataatg
gtatttcttgcgtttatgattgggatgtttatcctgtattcctactatcttggtgcaaaa
gtgaatccagccttcacaacagttgaagaaagtttcaagacacttttctggtcaatattt
ggtttgtctgaagtttcttctgttgtcctcaaatatgaccataaattcatcgagaacatt
ggctacgtcttatatggaatatacaatgtcactatggtggtggttttgctcaacatgctg
attgccatgatcaatagctcatatcaggaaattgaggatgatgcagatgtggaatggaaa
tttgcccgttcaaagctgtggatgttctactttgaccatgggaaaacgctaccccctcca
ttcagtctgatgcctactccaaagtcgtgtatcagtttgatagtaagaatcaaaaactgt
ctccttggcctgttcaaatgcagaaggaaaagactgaagaaagatgtagaaattggaatg
atgaattcaaagtccaggctaaatctatttgcacagtctaatctaaggatttcagaaacc
caaagtttcaacagcattataaaccaaccaaccagatatcagcaaataatgaagcgactg
attaaacggtatgtcttgaaagcacaagttgataaagaaaatgatgaggtcaatgaaggt
gaactgaaagaaatcaaacaggatatctcaagccttcgatatgaacttctggaagataag
tcccaagcaacggaggagctggctttcctcattcaaaagcttggtgaaaagcttaatacc
tgtctggcaaaacaaaaacacgagtga
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