KEGG   Leucoraja erinaceus (little skate): 129704617
Entry
129704617         CDS       T09122                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
leri  Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:leri00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:leri03037]
    129704617 (ift122)
Cilium and associated proteins [BR:leri03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   129704617 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Zn_ribbon_IFT122_C WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 TPR_GEMI5 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N TPR_IFT80_172 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_EML TPR_IF140-IFT172 eIF2A Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st B-prop_COPA_B_2nd PEP5_VPS11_N Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_IFT140_2nd TPR_COPA_B WD40_RFWD3
Other DBs
NCBI-GeneID: 129704617
NCBI-ProteinID: XP_055503834
LinkDB
Position
16:23570777..23627069
AA seq 1187 aa
MRAVPTWIDRVHDREKLEQCIYDIAFKPDGTQLIVASGNRVLVYDSSDGTLIQPLKGHRD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCIAYNPVTHRLASCSSS
DFGLWSPEQKSVSKHKVNSKITCCSWTNDGQYLAIGLYNGIVSIRSKNGEEKVRIERAGG
VPIWSICWNPSKDEHTDILAVADWGQRLSFYQLSGKQIGKDRALNFDPCCVSYFTKGEYI
VMGGSDKQVSLYTKDGVRLGSIGEQQSWVWTCRVKPDSNYVVAGCQDGTIAFYQIIFSTV
HGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIHELF
SEDNTDMHYRVKEKIAKKFECNLLVVCSQHLILCLEKRLQCLSFSGVKEREWLMESLIRY
IKVIGGPTGREGLLVGLKNGQILKIFVDNPFAIVLLKQATSVRCLDMSMSRNKLAVVDEH
NTCLVYDLSTKELLFQEPNANSVAWNTQCENMLCFSGGGFLNIKASNFPVHQQKLQGFVV
GYNGSKIFCLHVYAMSAVEVPQSAPMYQYLEKKMYKEAYQIACLGVTENDWRDLAMEALE
GMDFETAKKAFVRVRDLRYLELINNIEERKKHGENDNELFLADVHAYQAKFHEAAKLYKK
TGNNSRALNMYTDLRMFDYAKDFLGSGDPKDTKMLITKQADWARNINEPKAAAEMYISAG
EHLKAIEIIGDNGWVDMLIDVARKLDKAEREPLSRCAYFLKKLQHPGYAAETYMKMGDLE
AQILLHVETRHWEEAFSLVEKHPEFKDLVYVPYAQWLAENDQFEEAQKAFHKAGQQDEAV
KVLEQLTHNAVLESRFNDAAYYYWMLSMQCLDIAREKKEKQLEMLKKFHHFQNLAELYHA
YHSIQRYTDEPFSSHLPEALFNISRFLLHNLTKETPLGISKVNTLFALAKQSKALGAYKL
ARHAYDKLQGLRIPTRFQESIELGSLTIRSKPFHDSEDFVPMCYRCSTNNPLLNNQGNVC
INCRQPFVFSASSYEVLPLVQFYLEEGITDEEAVALIDREAPKTEQKKDTWQETTIGDSQ
TLHLDDDMAKIEADPFTAKLSFEQGGSDFVPVVVNREVLQSMSKRDVLIKRWPKPLRWHY
YRSLLPDVSITMCPTCFQMFHSEDYELLVLQHNCCPYCRRPIDESSP
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgcgagccgtccccacctggatagacagggtacacgaccgggagaagttggagcagtgt
atttacgatatagcattcaaaccagatggcacccagttgatagtagcatcaggaaacaga
gttctggtctacgactcttcggacggaacgctcattcaaccactcaaaggacaccgcgac
acagtctactgtgtagcctatgctaaagatggtaagcgatttgcatcaggttccgctgac
aagagtattattatctggacctctaaattagaaggcatcttgaagtatacccataatgat
tccattcagtgcattgcatataatccagtaactcaccgactggcttcctgctcctccagt
gattttggtttgtggtccccagaacaaaaatctgtctccaaacacaaagtcaatagcaaa
atcacttgctgcagttggacaaatgatggtcagtacttggccattggcctatataatggt
attgtcagtatccgaagtaagaatggagaagaaaaagtcagaattgagcgagctggtggt
gtcccaatatggtcaatttgctggaatccatccaaagatgaacacactgacatccttgct
gtagcagattggggacagcggctttcattctaccagctgagtggcaagcaaattggaaaa
gacagagcattgaattttgacccttgttgtgtcagctacttcacaaaaggagagtacatt
gtgatgggaggctcagataaacaagtctctttgtacaccaaagatggagttcgccttggt
agcattggagaacagcaatcctgggtttggacctgcagggtgaagccggattctaattat
gttgttgcaggttgtcaagatggtacaatagccttttaccaaatcatttttagcacagta
catggcctgtataaagaccgttatgcctatagagacagcatgactgatgttattgtccaa
catctcatcacagagcaaaaagtgcgtatcaaatgcagggaactagtgaagaagattgca
atttataaaaaccgactagcaatccagctgccagaaaaaatactgatccatgagctgttt
tctgaagataatactgacatgcattaccgtgtcaaggagaagattgctaagaaatttgag
tgcaacttgttggtcgtgtgctctcagcatcttatattgtgcctggagaaaagattacag
tgcttgtcatttagtggtgtgaaggagagagaatggcttatggagtcgctcattcgctac
attaaggttatcggaggaccaacaggaagagaagggttgttggttggtctgaaaaatggt
cagattttgaaaatatttgtggacaatccctttgccattgtgcttctgaaacaagcaaca
tctgtacgctgtttggacatgagtatgtctcgcaacaaactggctgtggtggatgaacac
aatacttgtcttgtatatgacctaagtaccaaggaacttctttttcaggagccaaatgct
aacagtgtggcctggaatacccagtgtgagaacatgctatgtttctctggtggtggtttt
ctcaacataaaagccagtaattttccagtgcaccagcagaagctccagggcttcgtggta
ggctacaatggctccaagatcttctgcctccatgtgtatgccatgtctgctgttgaggtc
ccacagtctgcacccatgtatcagtacttggaaaagaagatgtataaggaagcctatcag
attgcttgcctgggggtaacagagaatgactggagagatctggcgatggaggccttggaa
ggaatggactttgaaactgctaaaaaggcatttgttcgggtgcgagatctccgctatctg
gaattaattaacaacatagaagaacgtaaaaaacatggtgagaatgataatgagctgttt
ttagcagatgtgcatgcctatcaggccaaatttcatgaggctgccaagttatacaagaag
acgggaaataatagtcgagcactaaacatgtacacagatcttcggatgtttgactacgcc
aaggatttccttggctcgggcgatcccaaggacaccaagatgttgattactaaacaagca
gactgggccagaaacatcaatgaaccaaaagcagcagcagagatgtacatctctgctgga
gaacatctgaaagcaattgaaatcatcggggacaatggctgggttgatatgttaattgat
gtagctcgaaaactagataaggctgagagggaacccctatcaagatgcgcatatttttta
aagaagctgcaacatcctggatatgctgcagagacatatatgaagatgggggacctagag
gctcagatcctactgcatgtggaaaccaggcactgggaagaggccttctctttagtagag
aaacatccggaattcaaagacctcgtatatgtgccatatgcacagtggctggcagaaaat
gatcagtttgaagaagctcaaaaagcatttcacaaagctggtcagcaggatgaggcagtt
aaagttctcgaacagttgacccacaatgcggttctggaaagccggttcaacgatgcagcc
tattattattggatgttgtctatgcagtgcctggatatagctcgagaaaagaaggagaaa
cagcttgagatgcttaaaaagtttcaccacttccagaatctagcagaactctaccatgca
tatcactcaatccagagatatacggatgaacctttcagttcccatttacccgaagcactt
ttcaacatctcacggtttctattacataaccttaccaaagaaactcctttgggcatctcc
aaagttaatactttatttgctcttgccaaacaaagtaaagccttgggtgcatacaaactg
gctcggcatgcttatgacaaattgcagggcctgcgcattcctacaaggttccaggagtcc
atcgagctgggcagcctgacaattcgatccaagccattccatgacagtgaggactttgtg
ccaatgtgctacaggtgttcaactaacaacccactccttaacaaccagggaaatgtctgc
atcaactgccggcagccttttgtattctcagcttcctcttatgaggtgctgccacttgtt
cagttctatttggaagaagggattacagatgaggaagcagtagccctgattgatcgtgaa
gcacccaagacagaacagaaaaaggacacctggcaagaaacaaccattggcgattcgcaa
actctacaccttgatgacgatatggctaaaattgaggctgatccattcactgcaaaatta
agttttgagcaaggaggctcggactttgttcccgtggttgtgaacagggaagtattgcag
tcaatgagcaagagggatgttttgattaaacgttggccaaaaccattgaggtggcattac
tatcggtcactgttacctgatgtctccatcaccatgtgtcccacatgcttccagatgttt
cacagtgaagactatgaactacttgttcttcagcataattgctgcccatactgtcgccgg
ccaattgatgaatctagtccataa

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