Leucoraja erinaceus (little skate): 129705035
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Entry
129705035 CDS
T09122
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129705035 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
leri04054
]
129705035 (nod2)
Pattern recognition receptors [BR:
leri04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129705035 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
WHD_NOD2
AAA_16
AAA_29
AAA_30
AAA_22
nSTAND_NTPase5
LRR_4
NB-ARC
AAA_18
ABC_tran
nSTAND3
AAA_23
Roc
RsgA_GTPase
MCM
FtsK_SpoIIIE
TsaE
AAA_19
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
129705035
NCBI-ProteinID:
XP_055504391
LinkDB
All DBs
Position
17:5077497..5103620
Genome browser
AA seq
1029 aa
AA seq
DB search
MGSVGMSADQLLNAERYQFITVLGGGSVENFETILDHLLAWDLLNWEEYETVRSPGQLYS
SSRALLDMVMCKGARACELFILVWRQVFPRSQFLGIELKDYEPPDETDRSAAATQSARTL
QRCRPSVVRRLHGRTAAALLLLHGCGHFTQYECDEIQLPIYTPSQQARKLLDLTKGKGDD
AARVLLEYIESEPSPIKSVLDNARLKYQEKLSSTLAAQSRFLTNYAGTENMCLEDVYVNC
TLETTDTTSGGGRLLSSVGLHDIFGSEGVFNRDADVVLIVGDAGSGKSTLLQRLQQLWAM
RQHFQEFTFVFAFSCRRLNFIDGQVSLKMLLFEYCCWPDHHQDEVFQYILDHPEEVLFTL
DGFDELKLQFTEQVKHCSPTKPAPALNLISNLLQGNLLKNTRKVVSSRPNAVNAALRKYL
RKEFALKGFSREGIQAFIRRRHGGGSGSDAEHILHFVEANPAVHGLCHVPFFCWIVSKCH
EQLMQGGEAPAQTMTDIYLLVLDHALLHCTHHAQVGDDILPAHISTIFHLGKLAMDGLLS
CNYVFSASQLQEAQISEEDISMGFLVQSRSFSRVRAATRNRNYEFLHITIQCFFAALHIA
SSEDVGESALSSLFRAREKETSTCLKSAARIERFSLSCLRCGLQTDRRCKAMFRDAEKSN
LHITASFVSGLLSGRHKHLMHKFSGSPRQSKKSKLVKGYMAKGIEKHFLSIPPAVRDEKK
SMHALPEFVWWIKCIYEMQDDDLAKQAVSNLEVDHLKLTYCGIGPLECTALAYVLRHLKN
PVGLQLDYNSVGDIGIEQLLPCLGNCQSIYLRANNICDRGAATLVEQALGCSNLQKMALF
HNNLTDDCAENFARLLKHKDNFLALRLGNNHLTATGAVALAEGLKQNNSIQFLGLWGNKV
GDAGASALAKALEDNTSLIWLSLVDNNIGGRGARGLASMLKRNTALQELCLEENSLIDED
VQHFAEGLQNNTSLRVLKLSNNKITKKGMEFIVSALKHNVTVASIWLGGNQATAEEIEEV
TKAEARLTF
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtgtgggaatgagcgccgaccagctactgaacgcagaaagataccaattcatc
accgttcttggaggaggctccgtggaaaactttgagacaatcctcgatcacctgctagcc
tgggaccttctgaactgggaggaatatgaaacggtcaggtcgccggggcagctatatagt
tccagccgcgccctgctggacatggtgatgtgcaaaggggcgagagcatgcgagctcttc
atcctcgtgtggagacaagtctttcccagatcccagttcctgggtatcgaactgaaggac
tatgaaccgccggacgagacggacagaagcgcggcagcaacgcagtcggcccggaccctg
cagcgatgcagaccctccgtggtgcggaggctgcatgggcgcaccgctgctgcattgctg
ctactgcatggctgcggccactttacacaatacgagtgcgatgagattcaactgccgata
tatactccgtcccaacaggcacggaagcttctagatctcactaaaggaaagggggacgat
gcagctcgggtcctcctagaatatattgaatccgaaccctcgcccatcaagtctgtgctc
gataacgcacggttaaagtatcaggagaagttgagctccacgctcgccgcccagtcgcgg
tttctgactaactacgcggggactgaaaacatgtgcctggaggatgtttacgtcaactgt
accttggaaacgactgacacgacctccggggggggccgcctgctgtcttcagtcgggctg
cacgacatctttggatcggagggagtgttcaatagagacgcagatgtggtgttaatcgtg
ggggatgccggaagtgggaaaagcaccttgctgcagcgactgcaacagctgtgggccatg
aggcagcacttccaggagttcacatttgtgtttgcgttcagctgccgaaggttaaacttc
attgacgggcaagtctcgctcaagatgttactgtttgaatactgttgttggccagaccat
catcaggacgaggtgttccaatatatcctggatcaccccgaggaggttctgttcaccctg
gatgggtttgacgagctgaagttgcagttcacggagcaggtgaagcactgttctcccacc
aagcccgcccctgccctcaacctcatctccaacctccttcaggggaacctgctgaagaac
acgaggaaggtggtgagcagccggcccaacgcggtcaacgctgcgctgaggaagtacctg
cgcaaggagttcgccctgaaggggttctcgcgcgaggggatccaggcgttcatcaggagg
cgccacggcggcggcagcggctcggacgcggagcacatcctgcatttcgtggaggccaac
cccgccgtccacggcctctgccacgtccccttcttctgttggatcgtgtcaaagtgccat
gagcagctgatgcagggcggcgaggctccagctcagaccatgaccgacatctacctgctc
gtcctggatcacgccctcttgcattgtacgcatcacgcacaagtaggagacgatatcctc
cccgctcacatcagcaccatcttccatctcggcaagttggccatggacggcctgctctcc
tgcaactatgtcttttcagcttcgcaactgcaggaggctcagatatcggaagaagacatc
tccatggggtttctcgtccagagccgcagtttctcccgtgtccgggccgccaccagaaat
aggaactatgagtttcttcacatcaccatccagtgtttcttcgctgctcttcacatcgca
tccagcgaggatgtcggggagtcggccctctcctctttgttcagagccagggagaaggaa
acgtcgacttgtctgaagtccgcagctcgcatcgagaggttctcactcagttgcctccgg
tgcggcctgcaaacggacagaaggtgcaaagcgatgttcagggacgcagagaagtctaat
ctccacatcacagcgagctttgtctccgggctcctgtccggccgacacaaacacctgatg
cacaaattctcaggcagcccgaggcagtcgaagaagtccaaactggtaaagggctacatg
gcaaagggcatcgagaagcacttcctgtccataccgccagccgtcagggatgagaaaaag
agcatgcatgccttgcctgagtttgtgtggtggatcaaatgcatttatgaaatgcaggat
gatgatttggccaagcaggccgtgagcaacctggaggtggatcacctgaagctgacctat
tgtgggataggaccattggagtgcactgccctggcctacgttctgagacacttgaaaaat
cccgtcggattacaattggattacaactcagtcggcgatatcggcattgaacagctcctg
ccttgcctgggaaactgccagtccatctacctccgggcaaataacatttgtgatcgggga
gctgccacactggtcgaacaagctctcgggtgcagcaacttacaaaagatggcgttgttt
cataacaatttaaccgatgactgcgctgagaattttgcgaggcttctgaaacacaaggat
aactttctagcactaaggctgggtaacaaccacctaacagccactggagcagtggcactg
gcagaaggtttgaaacaaaacaactccatccagttcttggggctttggggaaacaaggtc
ggagatgcaggagcctcggccttagctaaagcccttgaagataacactagtctgatatgg
ctgagcctcgtcgataataacatcggtggtcgaggtgccagaggtttggcttccatgttg
aaaaggaacactgccctgcaggaactgtgccttgaggagaacagtttaattgatgaggat
gtgcagcattttgcagaaggactgcagaacaacaccagcttgagggttctcaagttgtct
aataataagataaccaaaaaaggaatggaattcattgtttctgcgctaaagcacaatgtt
accgttgcgtctatttggttaggtggaaatcaggcgactgctgaggagattgaagaggtg
accaaagcagaagcaagactgacgttttga
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integrated database retrieval system
