Leucoraja erinacea (little skate): 129705743
Help
Entry
129705743 CDS
T09122
Symbol
ctsd
Name
(RefSeq) cathepsin D
KO
K01379
cathepsin D [EC:
3.4.23.5
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04140
Autophagy - animal
leri04142
Lysosome
leri04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129705743 (ctsd)
04140 Autophagy - animal
129705743 (ctsd)
09143 Cell growth and death
04210 Apoptosis
129705743 (ctsd)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129705743 (ctsd)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129705743 (ctsd)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.23 Aspartic endopeptidases
3.4.23.5 cathepsin D
129705743 (ctsd)
Peptidases and inhibitors [BR:
leri01002
]
Aspartic peptidases
Family A1: pepsin family
129705743 (ctsd)
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129705743 (ctsd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp
TAXi_N
A1_Propeptide
TAXi_C
DUF6748
Motif
Other DBs
NCBI-GeneID:
129705743
NCBI-ProteinID:
XP_055505491
LinkDB
All DBs
Position
18:complement(20768172..20788889)
Genome browser
AA seq
398 aa
AA seq
DB search
MKLASSLVLLQLAAIAVCDGLLRIPLKKFRSIRRTFTDTGNSIDELLARDQNSKYNLGFP
QSSEPTPETLKNYLDAQYYGEISIGTPPQMFTVVFDTGSSNLWVPSIHCSVLDIACMLHR
KYDSAKSSTYVKNGTKFSIQYGSGSLSGYLSQDATSIGDIIVQNQLFGEATSQPGATFIA
AKFDGILGMAYPCISVAGAVPVFDNIMKQKLVERNVFSFYLNRNPDTQPGGELLLGGTDP
KYYTGDFFFVNVNRKAYWQIQMDEITVGDTLTLCKGGCSAIVDTGTSMITGPKVEIESLH
KAIGAVLITQGEYKVDCNKVSTLPPVNFIIKRKSFTLTAEQYVLKEQQAGMTICLSGFMA
LDIPPPAGPLWILGDVFIGQYYTQFDRDNNRVGFAKAA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgcttcctcgctggtgttgctacaattggctgcaatcgccgtctgcgatgga
ctcttacggatccctttgaaaaaattccgttcaattcggcggaccttcactgacactggg
aatagcattgatgagcttcttgcaagagaccaaaactccaaatataaccttggtttccca
caaagcagtgagcccactccggaaacactgaagaactatctggatgcgcagtactatggc
gagatcagcattggcactcctccacagatgttcaccgtggtatttgacactggttcctcc
aacctctgggttccttccattcattgttccgtgttagatattgcttgcatgttgcatcgc
aagtatgattcagcgaaatccagcacgtacgtgaagaatggaacaaagttttctatccag
tatggttctggcagcctctcaggatatctcagccaggatgcaaccagtatcggtgatatc
atagttcagaatcagttgttcggagaggccacctcgcagcctggcgccaccttcatcgct
gccaaattcgatggcattctcggcatggcctacccgtgtatctcggtcgctggtgcggtc
ccagtattcgacaatatcatgaagcagaaattggtagaacgcaatgtgttctctttctac
ttgaacaggaatccagacactcagcctggaggtgagctcttgttgggtggcacagatcca
aagtattacactggagatttcttcttcgtgaacgtaaaccggaaggcatactggcagatc
cagatggatgaaattactgttggtgatacattgactctgtgtaaaggtgggtgttcagcc
attgtggacacaggaacttcaatgatcactggtcctaaagtcgaaattgaaagtctgcac
aaggccatcggagctgtactaattacccagggagagtacaaggttgattgtaacaaagtc
tccacactccctcctgtcaactttatcatcaaaaggaagagcttcactttgactgcagag
cagtatgtccttaaggaacaacaggctggaatgaccatctgcctgagtggattcatggct
cttgacatcccccctcccgccggccccctctggattcttggagacgtctttatcgggcag
tattacacccaatttgatcgagacaacaaccgagttggatttgcaaaagctgcgtaa
DBGET
integrated database retrieval system