Leucoraja erinaceus (little skate): 129705771
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Entry
129705771 CDS
T09122
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase isoform X1
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00592
alpha-Linolenic acid metabolism
leri01040
Biosynthesis of unsaturated fatty acids
leri01100
Metabolic pathways
leri01212
Fatty acid metabolism
leri03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
129705771 (fads2)
01040 Biosynthesis of unsaturated fatty acids
129705771 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
129705771 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
leri01004
]
129705771 (fads2)
Enzymes [BR:
leri01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
129705771 (fads2)
Lipid biosynthesis proteins [BR:
leri01004
]
Desaturase
Front-end
129705771 (fads2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
Virul_fac_BrkB
CHS4
Motif
Other DBs
NCBI-GeneID:
129705771
NCBI-ProteinID:
XP_055505538
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Position
18:complement(22927234..22987193)
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AA seq
443 aa
AA seq
DB search
MGKGGEKKEEEEFEKKVPLYTWDEIEKHNSRTDQWLVIDRKVYNITNWALKHPGGVRVIS
HYAGEDATDAFQAFHPNLTFVRKFLKPLLLGELAPGEPSQDHQKKLELIEDFRALRKTAE
DMELFKTDLVFFSLYLGHLFLLEFLAWFTLSYFGSGWIPTLMAALILATSQAQSGWLQHD
FGHLSVFRKTKWNHLLHKFLIGHMKGASGNWWNHRHFQHHAKPNIFNKDPDVNMLKVFVL
GNTQPVEFGKKKIKYLPYNYQHEYFFLIGPPLLIPVYFYIQITMTMITRRDWVDLAWATT
YYIRYFNTYASFYGFFGSVIFVLFVRFIESHWFVWVTQMNHIPMEIDDEKHKDWLSMQLD
STCNIEQSFFNDWFSGHLNFQIEHHLFPTMPRHNYYKIAPLVKSLCDKHGLSYQVKPLSQ
GFKDIVGSLKKSGDLWLDAYLHK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaggcggagagaaaaaagaagaagaggaattcgagaagaaagtacccctttac
acgtgggacgagattgagaagcacaatagcaggacggaccagtggcttgtgattgatagg
aaagtatacaacatcaccaactgggcgctcaaacacccgggaggggttcgggttatcagt
cattatgccggcgaagatgcaacggatgcattccaggctttccatccaaacctgaccttt
gtccggaaatttctgaaacctcttctgcttggtgagctagcaccgggagagcccagccag
gaccaccagaagaagctagagttgattgaagattttcgggccttgcggaaaacagcagag
gacatggaactatttaagacagatctggtctttttctccctctaccttggccaccttttt
ctcctggaattcctagcctggtttacgttgtcatattttgggtctggttggattccaacg
ctcatggctgccttaatcctggcaacctcacaggctcagtcaggctggcttcaacatgac
ttcggacatttgtcagttttccggaaaacaaaatggaaccacctgttacacaagttcctg
ataggtcacatgaagggagcttctggaaactggtggaatcatcgacacttccaacaccac
gccaagcccaacatctttaataaagaccctgatgtgaacatgctgaaggtgttcgtactg
ggaaacacacaacctgtggagtttggaaaaaagaagatcaagtatttgccgtacaactat
cagcacgagtacttcttcctcattggcccgcccctgctaattccggtgtatttctacatt
cagataacgatgacgatgatcacccgccgcgattgggtggatcttgcctgggcaacaacg
tactacatccgctacttcaacacttatgcctctttctatggattctttgggtctgtcatc
tttgttctattcgtcaggttcatcgagagccattggtttgtgtgggtgacccagatgaac
catattccaatggaaattgatgatgaaaagcacaaggactggctcagtatgcagttggac
tccacgtgtaacattgaacaatccttcttcaatgactggttcagtggccatctcaacttt
cagattgagcaccaccttttccccacgatgcctcgtcacaactactacaagatcgcacct
ttagtgaagtcgctgtgtgacaagcatggcctgagctaccaggtgaaaccattgtcgcag
ggctttaaggatatcgtagggtccctgaagaagtctggcgacttgtggttagatgcttac
ctccacaaatga
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