Leucoraja erinaceus (little skate): 129705911
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Entry
129705911 CDS
T09122
Name
(RefSeq) oxysterols receptor LXR-alpha-like
KO
K08536
liver X receptor alpha
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03320
PPAR signaling pathway
leri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129705911
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
129705911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129705911
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
leri03310
]
129705911
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129705911
Nuclear receptors [BR:
leri03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
129705911
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
129705911
NCBI-ProteinID:
XP_055505807
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Position
18:35130394..35194957
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AA seq
451 aa
AA seq
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MSAVSTTDNDYGERFFLHIPTSLVDQNRTQPDGRLWKDQDIGRKARSQHNYSGSHDGAAH
SYWNGSVKIENSLFFSASPNLAEQHVGKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSC
EGCKGFFRRSVIKSAQYSCKNGGQCEMDLYMRRKCQDCRLRKCQQAGMLEQCVLSEEQIR
RKKMKKLEEEVLKAVKVTPGSLSGWDIPILNVAQVEMIRRLVTAQQQCNKRSFSDRLKVT
PWPRGVDSHSREARQQRFAHFTELAIISVQELVDFAKQVPGFLDLTREDQIALLKTSTIE
IMLLETSRRYNPAIESITFLKDFSYSREDFARAGLQFEFINPIFEFSKCMNDLHLDDAEY
ALLIAINLFSADRPNVNDHELVERLRQPYVEALRSYTQINRPDDRLMFPRMLMKLVCLRT
LSSVHSEQVFALRLQDKKLPPLLSEIWDMQE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtgtctaccactgataatgattatggagaaagattttttctgcacataccg
acctcactggttgaccagaacaggactcaaccagacggcaggctttggaaagaccaagac
attgggaggaaagcaagatctcagcacaattactcggggtcccatgacggagcagctcac
agctactggaatggaagtgtgaaaatagaaaacagcctcttcttttcagccagcccaaac
cttgcagagcagcatgttgggaagaggaagaaagggcctgccccgaagatgttggggaat
gagctgtgcagcgtgtgtggggacaaggcctccggcttccactacaatgtgctgagctgc
gagggctgcaagggcttctttcgacggagcgtgatcaagagcgcacagtattcctgcaag
aacggcggccagtgcgaaatggatttgtacatgcgcaggaagtgccaggattgtcggctc
cggaaatgtcagcaagcgggaatgttggaacaatgtgtcctgtcggaagaacagattcga
cggaagaaaatgaagaagctggaggaagaagtgctgaaagcagtgaaggtgaccccaggt
tctctgtctggctgggacattccaatactcaatgtggcacaagttgagatgatcagaaga
ctggtcactgcacaacaacagtgcaacaagcgttcctttagtgaccgactgaaagtgact
ccatggccacggggtgtcgactcccacagtcgtgaggcgaggcagcagagatttgcacac
ttcacagaactcgcaatcatctcagtccaggaactggttgactttgcaaaacaggtgcca
ggattcctcgacctcacccgtgaagatcagatcgctctgctcaagacgtccactattgag
ataatgttgctggaaacctcacgaaggtataaccctgcgatagagtccataacctttctg
aaggatttcagctatagccgagaagacttcgccagggcaggactacagtttgaatttatc
aatcccatctttgagttctcaaaatgtatgaatgacctacatttggatgatgctgaatat
gctcttctaatagccatcaatctcttttcagcagaccgcccgaacgttaatgaccatgaa
ctagtggaaaggctacggcagccttacgttgaggctctccgctcctacacacagataaac
agaccggatgaccgcctgatgttcccacggatgttgatgaaactggtctgcctgcgcact
ctgagcagcgtccattcggagcaagtttttgcactacggctgcaggataaaaaattgccc
cccctcctgtcagaaatctgggacatgcaggaatga
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